Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03597 ATGGAAAGAAACTTGGGCTTAGTTGCAGGTTCTCACAACAGCAATGAATTCATTATCATACGTCAAGATGGTGATTTTCTTAGGGATGAGTGGGAAGGGTTGTGTGGTGAAGTGTGCCAGCTATGTGGAGAAGAAATAGGAGTTACTGAAGATGGTGATCTCTTTGTGGCTTGCAACGAGTGTGCCTTTCCCGTTTGCAGAAACTGTTATCACTATGAACGCCGGGAAGGAACCCAACTCTGCCCACAATGCAAAACCAGATATAAGCGTCTCAAGGGATGTGCGAGAGTTGAAGGTGACGAAGAAGAAGATGACATTGATGACTTAGAGAACGAATTCAAACAAGAGATGCATGTCACTATGTCTCCCGAGGATGATGAAACATCTCAAGAACATCATCATAGTGCTTTAGTTCCATCATACGTGATGAGTAAAGAGATGATTGGATTGCAATCCCGGGCCATGGATCCTTCGAAGGACCTTGCAGCTTATGGCTATGGAAGTGTTGCATGGAAAGAAAGAATGGAATTGTGGAAGCAAAGGCAACAGAGACTTGAAGAGTCTCATAATCATCACCAAAATCATGCTTCACCAGATGATGACACTGAATTCTCTCTAATGGACGAAGCAAGACAACCATTATCAAGAAAGATGGGAATTCCATCGAGTAAAATGAACCCATACAGAATGATGATAATAATAAGGGTGGTGGTTGTTGCTTTCTACTTCCATTATCGAGTAACTCATCCAGTTGAAAATGCATATGCCTTGTGGCTTGTATCAGTCATATGTGAGGTTTGGTTCACTCTTGCTTGGATTCTTCACCAATTCCCTAAATGGTTCCCTGTCCAAAGGGAAACCTACTTGGATCGTCTTTCCTTAAGGTTTGAAAAGGAAGGAGAGGGTTCAGAATCAGAGCTTTCAGCAATTGATATATTTGTTTCAACAGTTGATCCACAAAAGGAGGCACCATTGGTGACAGCAAACACTGTTCTTTCAGTACTGGCTGTGGATTACCCTGCTGATAAGGTTTCTTGTTATGTGTCTGATGATGGAGCAGCAATGTTAACATTTGAGGCCTTATCTGAAACTTCTGAATTTGCAAAGAAATGGGTTCCTTTTTGTAACAAGTTCAATGTTGAGCCTAGAGCACCTGAATCCTATTTTGCTGAGAAAATTAATTACCTTCAAGATAAGGTGCACCCTTCATTTGTCAAAGAGAGAAGAGCAATGAAGAGAGAATACGAAGAGTTTAGAGTTCGAATGAATTGTCTGGTTGCAAAAGCTGGGAAGGTTCCTGAAGAAGGTTGGACAATGCAAGATGGAACCCCATGGCCTGGCAATACTATTCATGATCACCCCGGAATGATACAGGTTTTTCTAGGAAAAAGCGGAGGACATGACAAGGATGGTAATGAACTACCACGTTTGATATATGTTTCAAGAGAAAAGCGACCTACTTTCAATCATCACACAAAAGCTGGTGCACTTAATTCATTGGTGAGAGTGTCTGCAGTGCTTTCCAATGCCCCTTTTGTGCTGAACTTGGACTATGATAATTACATTAACAATAGCAAGGCTATAAGAGAAGCCATGTGCTTCATGATGGATCCATTGTTAGGTCAAAGGGTTTGCTTTGTTCAATTCTCTCACAGATTTACTAATAATCATGCTAATGATGATGACTCATATCACAACCAAACAGCTGCTTTTACTGATGTTAAGATGAAAGGTTTGGATGGTATTCAAGGGCCTACATGCATTGGGGTAGGATGTGTGTTGAGAAGGCAAGCATTGTATGGTTATGATGCTCCAAGAAGAAAGAAGGGTCCAAGAAGAACATGCAACTGCTGGTCAAAGTGTTGTGGCTGCTGCGGATGGTGTTGCATGGGAAAGAAGAAGAAGAAGAAGTGCAACAAAGAGAGCAGCCATAGAAAAGTACATTCTGAAGCATCTATTCATCAGAGTGCTCTCAACTCTATTCAACATGTAACTCCACGAACTGAGGGTGAAATTTCGGGTCCAATAACGGAAGAGAAGTTAGCCAAAAAATTTGGACGATCTCCAATTTTCATTGCATCAACTCAATTGGGTGATGGCGAGGCAGTAAAACATGGCAGTCTCGCTTCTCTACTCACAGAAGCCATACATGTCATTAGTTGTGGCTATGAAGAGAAAACAGAATGGGGGAAAGAGGGTTTAAAATGCATTGCCATGGATGGAAATCTATATACTGTATTCCTGAGAGAGCTGCATTCAGAGTACTTGGTCCAAGAAACCTTGCAAATTATATGCAACAAGTGTTTGAAAGTGCCCTTGGATCCATTGAAATTTTCATGA 2340 0.4137 MERNLGLVAGSHNSNEFIIIRQDGDFLRDEWEGLCGEVCQLCGEEIGVTEDGDLFVACNECAFPVCRNCYHYERREGTQLCPQCKTRYKRLKGCARVEGDEEEDDIDDLENEFKQEMHVTMSPEDDETSQEHHHSALVPSYVMSKEMIGLQSRAMDPSKDLAAYGYGSVAWKERMELWKQRQQRLEESHNHHQNHASPDDDTEFSLMDEARQPLSRKMGIPSSKMNPYRMMIIIRVVVVAFYFHYRVTHPVENAYALWLVSVICEVWFTLAWILHQFPKWFPVQRETYLDRLSLRFEKEGEGSESELSAIDIFVSTVDPQKEAPLVTANTVLSVLAVDYPADKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCNKFNVEPRAPESYFAEKINYLQDKVHPSFVKERRAMKREYEEFRVRMNCLVAKAGKVPEEGWTMQDGTPWPGNTIHDHPGMIQVFLGKSGGHDKDGNELPRLIYVSREKRPTFNHHTKAGALNSLVRVSAVLSNAPFVLNLDYDNYINNSKAIREAMCFMMDPLLGQRVCFVQFSHRFTNNHANDDDSYHNQTAAFTDVKMKGLDGIQGPTCIGVGCVLRRQALYGYDAPRRKKGPRRTCNCWSKCCGCCGWCCMGKKKKKKCNKESSHRKVHSEASIHQSALNSIQHVTPRTEGEISGPITEEKLAKKFGRSPIFIASTQLGDGEAVKHGSLASLLTEAIHVISCGYEEKTEWGKEGLKCIAMDGNLYTVFLRELHSEYLVQETLQIICNKCLKVPLDPLKFS 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03597 779 MobiDBLite consensus disorder prediction 652 667 - -
Arst10g03597 779 MobiDBLite consensus disorder prediction 649 671 - -
Arst10g03597 779 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 112 IPR013083 -
Arst10g03597 779 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 211 732 - -
Arst10g03597 779 CDD mRING-HC-C4C4_CesA 37 87 - -
Arst10g03597 779 Coils Coil 92 112 - -
Arst10g03597 779 Pfam Cellulose synthase 310 732 IPR005150 GO:0016020|GO:0016760|GO:0030244
Arst10g03597 779 MobiDBLite consensus disorder prediction 182 204 - -
Arst10g03597 779 SUPERFAMILY RING/U-box 28 107 - -
Arst10g03597 779 Pfam Zinc-binding RING-finger 35 105 IPR027934 -
Arst10g03597 779 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 461 604 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03597 Arst-Chr10 103737609 103752655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03597 7 732 Glycosyltransferase AT5G64740 56.057 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03597 K10999 - gmx:100815971 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03597 10 103737609 103752655 Arst10g03597 10 103737609 103752655 ECH
Arst1g02980 1 91519463 91524536 Arst10g03597 10 103737609 103752655 PCT