Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03595 AAAAATAAAGGAATGGATCAAAGTGGTGGAATTGCGACTGGGCCGCGCGATGTCCTTGGAGTTAGGAACGGTTCCGACATTGGGTGTAAACCCTTAAAGAATTTGAATGGTAAAATCTGTCAGATGTGTGGCGATACTGTTGGATTAACAGCCACCGGTGATGTTTTTGTTTCTTGCCAAGAATGTTCCTTCCCACTTTGTCACCGTTGCTATGAATGTGAGTGCGAGAATGGGAACCAATCTTGCCCCCAGTGCAAGACCAGATACAATAGTCACAAAGATAGTTCCCATTTGGAGGGAGATGAGGATGATGATGAAGATGATGATGATGTTGATGATATTGAGAATGAGGTAAATTATGGAGAAGGAAACATTAACAAAGCAGGGATGCAATGGGAAGAAGATGCTGACCTCTCTTCTTCGTCGGGACATGATTCTCGGATGCCAAACTCAAATCTCCATATCACAAATGGGCAGCCGCTATCTGGCGAAAAACCGTATGCTACTCCTGATACAAAATCTGTTCAAGCTACATCTGGTCCTTTGGGTCCATCCAAGGCTCACTCACTTTCCTACACCGATTCAAAGCAGCCAGGTCTTGAGAGTGATGAAGAGGTCAGAAGAGTGCCAGAGATCGGAGGTGAATCTGCTGGACCTTCAGCTTCCCGTCCAGGCGCCGGTCCAACTGGTGGGAAAGAACGTGGTCAGGGGACTGGGGATGGTCAACGGAAGAGAGGCAGAAGCCCGGCAGACAAAGAAAACAAACGGCTAAAGAGGCTACTGAGGAACAGAGTGTCAGCTCAACAAGCAAGGGAGAGGAAAAAGGCATATTTGATCGATTTGGAAACCAGAGTCAAAGACTTGGAGAAGAAGAACTCAGAGCTCAAAGAGAGGCTTTCCACTCTGCAGAATGAGAACCAAATGCTAAGACAAATATTAAAGAATACAACAGCTAGCAGGAGAGGGAGCAACAGTGGTACAAATGCTGAATAA 993 0.4612 MIIFHLIGKKNKGMDQSGGIATGPRDVLGVRNGSDIGCKPLKNLNGKICQMCGDTVGLTATGDVFVSCQECSFPLCHRCYECECENGNQSCPQCKTRYNSHKDSSHLEGDEDDDEDDDDVDDIENEVNYGEGNINKAGMQWEEDADLSSSSGHDSRMPNSNLHITNGQPLSGEKPYATPDTKSVQATSGPLGPSKAHSLSYTDSKQPGLESDEEVRRVPEIGGESAGPSASRPGAGPTGGKERGQGTGDGQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDLEKKNSELKERLSTLQNENQMLRQILKNTTASRRGSNSGTNAE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03595 339 SUPERFAMILY Leucine zipper domain 264 322 IPR046347 GO:0003700|GO:0006355
Arst10g03595 339 SMART brlzneu 260 324 IPR004827 GO:0003700|GO:0006355
Arst10g03595 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 122 IPR013083 -
Arst10g03595 339 SUPERFAMILY RING/U-box 35 120 - -
Arst10g03595 339 Gene3D Single helix bin 283 324 - -
Arst10g03595 339 Pfam bZIP transcription factor 261 322 IPR004827 GO:0003700|GO:0006355
Arst10g03595 339 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 267 282 IPR004827 GO:0003700|GO:0006355
Arst10g03595 339 Coils Coil 259 328 - -
Arst10g03595 339 CDD bZIP_HY5-like 265 316 - -
Arst10g03595 339 MobiDBLite consensus disorder prediction 246 283 - -
Arst10g03595 339 MobiDBLite consensus disorder prediction 151 206 - -
Arst10g03595 339 FunFam Transcription factor HY5 283 324 - -
Arst10g03595 339 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 181 336 IPR044280 GO:0000981|GO:0045944
Arst10g03595 339 Pfam Zinc-binding RING-finger 39 115 IPR027934 -
Arst10g03595 339 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 262 325 IPR004827 GO:0003700|GO:0006355
Arst10g03595 339 MobiDBLite consensus disorder prediction 109 126 - -
Arst10g03595 339 MobiDBLite consensus disorder prediction 101 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03595 Arst-Chr10 103725951 103733055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03595 208 321 bZIP Transcription Factor Family AT5G11260 73.913 4.13e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Arst10g03595 zf-UDP 6.2e-33 CL0229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03595 K10999 - aprc:113855639 471.085