Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03580 ATGGACAGTATCTTGGGTCTCCTCAAACTTAGGATTAAGAAAGGCATTAATCTCGCAGTTCGAGATACTTCTTCTAGTGACCCTTATGTTGTTGTCAACATAGGGGAACAGAAGCTCAAAACTAAGGTCATCAAAGACAACTGTAATCCAGAGTGGAATGAAGAACTGATTCTTTCTATTAAGGATTTTAATACTCCAATAAATTTGACGATTTACGACAAAGACACCTTATCGTCGGACGACAAAATGGGTGAGGCGATTATAGAACTGAGGCCTTATCTTCAGTGCTTGGTGATGGGGTTGGAGAGGCTTCCAGATGGGTGCGTGGTGAAGAGGATTCAGCCAAATAGGGTTAACTGCCTTGCTGAAGAGAGCTCTTGCATTTGGCAAGATGGGACTATAATCCAAGAGATGATCTTGAGATTGAAAAATGTTGAGTGTGGTGAACTTGTTTGTGAAATGGAGTGGGTTGATGTACCTGGTTGTAAGGGTTTATCAGAGCTACGACCTTAA 513 0.4172 MDSILGLLKLRIKKGINLAVRDTSSSDPYVVVNIGEQKLKTKVIKDNCNPEWNEELILSIKDFNTPINLTIYDKDTLSSDDKMGEAIIELRPYLQCLVMGLERLPDGCVVKRIQPNRVNCLAEESSCIWQDGTIIQEMILRLKNVECGELVCEMEWVDVPGCKGLSELRP 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03580 170 SMART C2_3c 7 102 IPR000008 -
Arst10g03580 170 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Arst10g03580 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 157 IPR035892 -
Arst10g03580 170 CDD C2_ArfGAP 5 148 - -
Arst10g03580 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 163 IPR044562 -
Arst10g03580 170 Pfam C2 domain 7 92 IPR000008 -
Arst10g03580 170 Gene3D C2 domain 4 162 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03580 Arst-Chr10 103662013 103664614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03580 38 166 C2H2 Transcription Factor Family AT1G70790 63.359 1.10e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03580 - - qsa:O6P43_032566 258.84