Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03569 ATGGTTAATGCAATAAAGGTAGCGATTGCAGATGCAACGGTGACATGTATGTGGGTATTCATATCAGCGACGTTTGGGATGATGACAAGTTATATAACAAAAATGGTTGATCTTCATCACCTATCACATGGTGGTGTTGATTACCCTGCTATCATGGTAACAACTTTAGTCTTCTTCACATTTTTCTCTATATTCAATACTATTTGCAATGCCTTTGGAGGTGCCAGTTTCAACCCCACTGGTAATGCTTCCTTCTATGCTGCTGGTTCTGGCTCTGATTCCCTTTTCTCCATGGCTCTTCGTTTTCCAGCTCAGGCACTGGGTGCAGTTGGTGGTGCAGTGGCAATCATGGAAGTAATGCCATTAAAATACAGGCACATGATTGGTGGGCCTACTTTGAAAGTTGACTCACAAACTGGAGCAATTGTTGAAGGGGTTTTGACATTTCTGATTAGCTTTGTGGTACTCCTAATCTCACTCAAAGGTCCTCGTAGTTCAATCATGAAGACTTGGTTAATCGCCATGGCAGTTGTCATTGTTGTCCATCTCGGTTCTGTTTACACCGGCCCAGCCTTGAATCCTGCCATTGCCTTTGGTTGGGCATACTTAGAGAATTCACACAATACATGGGAGCAATTTTATGTTTATTGGATTGCCCCTTTCATTGGTGCAATATTGGCTTCTTGGTTATTTCGTATTGTCTTTCCACCAAGAGTAGTAAAACACAAGAAAGCTTGA 738 0.4214 MVNAIKVAIADATVTCMWVFISATFGMMTSYITKMVDLHHLSHGGVDYPAIMVTTLVFFTFFSIFNTICNAFGGASFNPTGNASFYAAGSGSDSLFSMALRFPAQALGAVGGAVAIMEVMPLKYRHMIGGPTLKVDSQTGAIVEGVLTFLISFVVLLISLKGPRSSIMKTWLIAMAVVIVVHLGSVYTGPALNPAIAFGWAYLENSHNTWEQFYVYWIAPFIGAILASWLFRIVFPPRVVKHKKA 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03569 245 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g03569 245 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g03569 245 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g03569 245 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g03569 245 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g03569 245 SUPERFAMILY Aquaporin-like 4 238 IPR023271 -
Arst10g03569 245 Gene3D Glycerol uptake facilitator protein. 2 244 IPR023271 -
Arst10g03569 245 PANTHER AQUAPORIN SIP1-1 3 243 IPR044222 GO:0015250
Arst10g03569 245 Pfam Major intrinsic protein 3 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Arst10g03569 245 FunFam Aquaporin SIP1-1 2 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03569 Arst-Chr10 103562020 103564458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03569 2 244 Major Intrinsic Protein MIP AT5G18290 52.653 7.87e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03569 K09875 - gmx:100788738 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g02808 6 89438424 89442399 Arst10g03569 10 103562020 103564458 PCT