Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03565 ATGGTGAATCCAATTACTGAAGCTGATAACAAGTGCCCCATTTGTGACACAGAATTTGCTGAGATAATCATGGATAACATAAGAGATCAAAGTGATAATGCTATTGATTTAAGGTCTACTTGGATGTTCATACTTTATGCACCAATATTTCTAGGCTTGATGGGTGCAATTAGCCCTCTTATTCCCCCCGGCGGCGCCGCTCCTCCGGCCGGCGAAGACGAGACAGAGAGCGAACTTACGACGAGGAGAAGAGGATCGACTAGTTATGTAATGCATCTCTTCCGAGGTCTTCATGTTAGGAGCTTTGATAATAATAATCGTAGTACTCGCAATAGAAGTGTAGACGCCAGCAACATGGTTGTCATTGATCCGTTTACGGACGGAGCCTTGATTTTTCGAGTTCCGAACATGAATCATCATACAACAACGAGTAGCAGTCAAAATGACAGCACGAGCATCGGATCGTTCCATGAGTTTCTGGTGGGATCAGGATTCGATTTGTTGCTACAGCAGTTGGCACAGAACGGAGGAAGTGGATATGGAAGTGTTGTGAACCCGCCAACAAAGAAGGCAGCAATAGAAGCATTACCGAGTGTGATTATCAGTGAAGAGATTTTACAGTGCATGGTTTGTTTGGAAGAGATTGAGATTGGAAATGAAGCAAAGGAGATGCCATGTCTCCATAAATTTCATGGTGACTGCATAATCTCATGGCTTAAACCTCATAGTTCATGCCCTGTTTGTAGGTTTCAGATGCCTTTTGAGGATTTCACAGCTGAAATTAGCAACGATGGGAATCAAAATAGTGAACTTGTCACAGGATCAAGAAGGAACTGGTTTCCAATGCTGCAATCGTTTAATAATTTTCTTCCACCACCTTGA 882 0.4297 MVNPITEADNKCPICDTEFAEIIMDNIRDQSDNAIDLRSTWMFILYAPIFLGLMGAISPLIPPGGAAPPAGEDETESELTTRRRGSTSYVMHLFRGLHVRSFDNNNRSTRNRSVDASNMVVIDPFTDGALIFRVPNMNHHTTTSSSQNDSTSIGSFHEFLVGSGFDLLLQQLAQNGGSGYGSVVNPPTKKAAIEALPSVIISEEILQCMVCLEEIEIGNEAKEMPCLHKFHGDCIISWLKPHSSCPVCRFQMPFEDFTAEISNDGNQNSELVTGSRRNWFPMLQSFNNFLPPP 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03565 293 ProSiteProfiles Zinc finger RING-type profile. 208 249 IPR001841 -
Arst10g03565 293 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 111 253 - -
Arst10g03565 293 Pfam Ring finger domain 207 249 IPR001841 -
Arst10g03565 293 SUPERFAMILY RING/U-box 199 255 - -
Arst10g03565 293 MobiDBLite consensus disorder prediction 65 84 - -
Arst10g03565 293 SMART ring_2 208 248 IPR001841 -
Arst10g03565 293 FunFam E3 ubiquitin-protein ligase RNF181 178 255 - -
Arst10g03565 293 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 180 254 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03565 Arst-Chr10 103528487 103529368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03565 163 267 C3H Transcription Factor Family AT1G26800 44.340 4.41e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03565 - K11982 aip:107621247 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03565 10 103528487 103529368 Arst10g03565 10 103528487 103529368 ECH