Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03542 ATGGCGAAAATTCCCATCTTTATGGTGGGTTTATTGCTGTTGAACTGCTGGGTAGCCTTGGCAGATGCAGAGTACTTGAAATATAAAGATCCAAAACAGCCTTTGAATGTTCGAATCAAGGATCTCATAAACAGAATGACTTTGGAGGAGAAGATTGGCCAAATGGTGCAGATTGATCGCACTGTTGCATCAGCTAATGCCATTAACAAGTACTTTATAGGGAGTGTGCTAAGTGGGGGAGGAAGTGTTCCAAAGAAGGAGGCTAGTGCAGAGGATTGGATTAACATGGTGAATGATTTTCAAAAAGGTGCCTTATCAACCAGGCTGGGAATTCCTATGATTTATGGAATTGATGCTGTTCATGGCCATAACAATGTCTACAAAGCAACCATTTTTCCTCACAACATTGGGATGGGAGCTACTAGGGACCCAGAACTTGTGAAGAAGATTGGAGAAGCAACTGCACTTGAAGTTAGAGCTACCGGAATTCCATATGTGTTTGCACCTTGCATTGCGGTTTGTAGAGATCCAAGGTGGGGTCGCTGCTATGAAAGTTATAGTGAAGATCCTACACTAGTCCAAGCTATGACAGAGATCATTCCCGGATTGCAAGGTCAAATCCCTGCAAATTCACGAAAGGGTGTTCCCTTTGTTGCTGGAAAAAAGAATGTAGCAGCTTGTGCTAAACACTATGTCGGAGATGGAGGAACCACAAAAGGAATCAATGAGAACAACACAGTGATAGATAGACATGGATTGCTTAGCATTCACATGCCAGGCTACTATAACTCAATCATCAAGGGAGTGTCTACTGTCATGGTTTCTTTCTCGAGCTGGAATGGAGTTAAGATGCACGCTAACCGTGAACTAGTCACTGGCTTCCTCAAGAACACACTTCGTTTCAGGGGTTTTGTTATATCAGATTGGCAGGGAATTGATAGGATTACTTCCCCTCCTCATGCCAACTATACATATTCCATTCTTACCGGAATTACTACTGGAATTGACATGATAATGGTTCCTTTCAACTACACAGAATTCATAGATAGCCTAACCTCTCTAGTGAAACATAATTTCATACCCACGAGTCGAATTGATGATGCAGTGAGGAGAATTTTAAGGGTTAAGTTCATGATGGGCCTTTTTGAGAATCCACTTGCTGATTACAGCTTAGTCAACCAACTTGGGAGACAGGAGCATAGAGACTTAGCTAGAGAAGCTGTAAGGAGATCATTAGTCTTGTTAAAGAATGGTCAATATGCACATAAACCATTGCTTCCTCTTCCTAAGAAGGCTTCAAAAATACTTGTTGCCGGAAGCCATGCTGATAATCTCGGTTATCAGTGTGGTGGTTGGACCATTGATTGGCAAGGACTAAGTGGAAACAATCTTACCACTGGCACAACTATTCTAAGTGCTATAAAAAACACTGTTGATAAAGACACTATGGTGGTTTACAAGGAGAACCCTGATTTGGAGTATGTGAAGTCCAATGATTTTTCATATGCAATTGTGGTAGTTGGAGAGCATCCCTATGCAGAGACTTTTGGAGACAGCTTGAACTTGACAATACCAGATCCTGGTCCACAAACCATAACAAATGTGTGTGGAGGACTGAAATGTGTTGTTGTAGTAATCTCTGGTCGCCCTGTGGTTATACAGCCATATCTTGACACCATTGAAGCACTTGTTGCTGCTTGGCTTCCAGGAACTGAGGGTCAAGGTGTTGCTGATGTTCTGTTTGGTGATTATGGTTTCACTGGCAAGCTTCCAAGAACATGGTTCAAGACTGTTGATCAGTTACCTATGAATGTTGGTGATTCTCATTATGATCCTCTCTTCCCCTTTGGATTTGGCCTCACTACCAAACCAGTTAATTAA 1881 0.4205 MAKIPIFMVGLLLLNCWVALADAEYLKYKDPKQPLNVRIKDLINRMTLEEKIGQMVQIDRTVASANAINKYFIGSVLSGGGSVPKKEASAEDWINMVNDFQKGALSTRLGIPMIYGIDAVHGHNNVYKATIFPHNIGMGATRDPELVKKIGEATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPTLVQAMTEIIPGLQGQIPANSRKGVPFVAGKKNVAACAKHYVGDGGTTKGINENNTVIDRHGLLSIHMPGYYNSIIKGVSTVMVSFSSWNGVKMHANRELVTGFLKNTLRFRGFVISDWQGIDRITSPPHANYTYSILTGITTGIDMIMVPFNYTEFIDSLTSLVKHNFIPTSRIDDAVRRILRVKFMMGLFENPLADYSLVNQLGRQEHRDLAREAVRRSLVLLKNGQYAHKPLLPLPKKASKILVAGSHADNLGYQCGGWTIDWQGLSGNNLTTGTTILSAIKNTVDKDTMVVYKENPDLEYVKSNDFSYAIVVVGEHPYAETFGDSLNLTIPDPGPQTITNVCGGLKCVVVVISGRPVVIQPYLDTIEALVAAWLPGTEGQGVADVLFGDYGFTGKLPRTWFKTVDQLPMNVGDSHYDPLFPFGFGLTTKPVN 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03542 626 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 412 621 IPR036881 GO:0004553|GO:0005975
Arst10g03542 626 FunFam Glycosyl hydrolase family protein 397 623 - -
Arst10g03542 626 PRINTS Glycosyl hydrolase family 3 signature 294 312 IPR001764 GO:0004553|GO:0005975
Arst10g03542 626 PRINTS Glycosyl hydrolase family 3 signature 224 240 IPR001764 GO:0004553|GO:0005975
Arst10g03542 626 PRINTS Glycosyl hydrolase family 3 signature 108 124 IPR001764 GO:0004553|GO:0005975
Arst10g03542 626 PRINTS Glycosyl hydrolase family 3 signature 132 151 IPR001764 GO:0004553|GO:0005975
Arst10g03542 626 PRINTS Glycosyl hydrolase family 3 signature 178 194 IPR001764 GO:0004553|GO:0005975
Arst10g03542 626 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 23 624 - -
Arst10g03542 626 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 23 624 - -
Arst10g03542 626 Pfam Glycosyl hydrolase family 3 C-terminal domain 412 621 IPR002772 GO:0004553|GO:0005975
Arst10g03542 626 SUPERFAMILY (Trans)glycosidases 26 411 IPR017853 -
Arst10g03542 626 Gene3D - 21 396 IPR036962 GO:0004553|GO:0005975
Arst10g03542 626 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 21 396 - -
Arst10g03542 626 Gene3D - 397 623 IPR036881 GO:0004553|GO:0005975
Arst10g03542 626 Pfam Glycosyl hydrolase family 3 N terminal domain 47 375 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03542 Arst-Chr10 103428106 103437696 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03542 11 624 Glycoside Hydrolase AT5G20950 75.896 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03542 K05349 - gmx:100819414 1088.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03542 10 103428106 103437696 Arst4g03983 4 118369924 118370854 PCT