Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03512 ATGGCTGAGCCACAAGGTGGTGGTGCTGAAGGAAGCAGGCGTAGAAGCACTAGTGCCGCAAGGCGTGGCGCGGCGGCGCCAACGCAAGAGGGAGCGCCGCCGCCATCTCCGAGTAGTCCATGCGGCGCTTGCAAGTTCTTGAGGAGGAAGTGTGTTGCAGGGTGCATCTTTGCACCCCACTTTAGCTCGGACCAAGGTGCCGCTAAGTTTGCGGCGGTTCACAAGGTGTTTGGTGCTAGCAATGTGTCGAAGCTTTTGTTGCATGTTCCGGCACACCGCCGCAATGAAGCGGTGGCGACTATTTGTTACGAGGCTCAGGCAAGGCTATCTGATCCGGTTTATGGTTGTGTGTCCACCATTCTCTCTTTGCAACAACAGGTGGCATCTTTGCAAGCAGAGGTGGCTATGACTCAAACTCAAGTGATGAATGGAAGGATTGCATATGCAAGTGTTCTTGACACCACCCAGCAGCAGCAGCAACAGCAACAACAAGCACTACAGCATCACCACCCAAACATGATCAACACTCTGGGGCTGTATCCGGCATTCTCAAACAGCTCATCTGCCTCCACAACTAACCTTATGAACATCACCAACTTCAACCCTGCTACCGGTGGTTTCGACCTCTCAATGGAGGCGGCAACAGCACCCTCATCGTCTCACAGCATTCATCCACTTCATCATAATAGCAATTTCTCTCGCTTGTCTCAATATGATGATGATGATGAACAAGAAAGCAAGATTCCTCCGGTCTTTAACCCTGATCTTTAG 771 0.5175 MAEPQGGGAEGSRRRSTSAARRGAAAPTQEGAPPPSPSSPCGACKFLRRKCVAGCIFAPHFSSDQGAAKFAAVHKVFGASNVSKLLLHVPAHRRNEAVATICYEAQARLSDPVYGCVSTILSLQQQVASLQAEVAMTQTQVMNGRIAYASVLDTTQQQQQQQQQALQHHHPNMINTLGLYPAFSNSSSASTTNLMNITNFNPATGGFDLSMEAATAPSSSHSIHPLHHNSNFSRLSQYDDDDEQESKIPPVFNPDL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03512 256 PANTHER LOB DOMAIN CONTAINING PROTEIN 38 197 - -
Arst10g03512 256 MobiDBLite consensus disorder prediction 234 248 - -
Arst10g03512 256 Pfam Lateral organ boundaries (LOB) domain 40 138 IPR004883 -
Arst10g03512 256 Coils Coil 120 140 - -
Arst10g03512 256 MobiDBLite consensus disorder prediction 1 39 - -
Arst10g03512 256 MobiDBLite consensus disorder prediction 216 256 - -
Arst10g03512 256 ProSiteProfiles LOB domain profile. 39 141 IPR004883 -
Arst10g03512 256 MobiDBLite consensus disorder prediction 216 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03512 Arst-Chr10 103242061 103244589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03512 1 246 AS2 family AT3G03760 49.615 1.96e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst10g03512 LOB 2.8e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03512 10 103242061 103244589 Arst10g03512 10 103242061 103244589 ECH