Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03511 CCAGTCCCTTTCCGCAACACCGTCGACCACTACCCCTACGCCTACTTCCTCTACACCCCTTCCCTCATCCTTCCCTCCGCCGCATCCCGCCTCCTCCGCCAACCCTGGGGATCCTCTGCTCCTCTCGCCTCCGCGCCGAGTCGGATCCCCGCGGAATCGGTGAGTTTGGTCGACGAGTTAGGTCAGAGTGTGTTGTCTGGTTGCGACTGCGAGGCTTGTGGCGGTGTGGGTTCCGACTGCCCTTGTTTGGGCTTGGGTGGGCTGGATGACGTGGGCAGTGAGTGTGGGCCGGGATGTGGGTGCGGACCACAGTGCGGAAACCGGTTGACTCAGAATGGGGTTGCTGTTCGGGTGAAGATTGTGAGGGATGCAAGGAAAGGGTGGTGTTTGCATTCTGACCAGTGGATTCGGAAAGAGGAGTTCTTGTTTGAGTATGCAGTGTATCCAATACATCATACGAATGTAAAACTGATTCATGGTTTCCTGCTTGGAAAAGGCGAACTCTTGACAACCAAGGAAGCGCGGAGGAGACATCAATGTTATGATGAAAAATCATCACATGGTAGATTCTCTTCTGCGCTTTTGGTTGTAAGGGAACATCTTCCATCTGGAAACGTATGCTTGAGATTGAATATTGATGCCACAAGAATAGGAAATGTTGCCCGATTTGTTAATCATTCTTGTGATGGTGGTAACTTGAGCACAAAGCTAATTAGAAGTTCAGGAGCTTTGTTCCCCCGCCTCTGCTTCTTTGCTTCGAAAGATATCCAGAAAGATGAAGAGCTTACATTTAGCTATGGAGAAATCAGGAAAAAGGCCAATGGTCTGCCATGCTTTTGCAGCAGCCCTTCATGCTTTGGAACTTTGCCTTCGGAAGACACTTGA 885 0.5073 ASITTRRSSDASRTFENLPVPFRNTVDHYPYAYFLYTPSLILPSAASRLLRQPWGSSAPLASAPSRIPAESVSLVDELGQSVLSGCDCEACGGVGSDCPCLGLGGLDDVGSECGPGCGCGPQCGNRLTQNGVAVRVKIVRDARKGWCLHSDQWIRKEEFLFEYAVYPIHHTNVKLIHGFLLGKGELLTTKEARRRHQCYDEKSSHGRFSSALLVVREHLPSGNVCLRLNIDATRIGNVARFVNHSCDGGNLSTKLIRSSGALFPRLCFFASKDIQKDEELTFSYGEIRKKANGLPCFCSSPSCFGTLPSEDT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03511 312 SMART set_7 134 291 IPR001214 GO:0005515
Arst10g03511 312 SUPERFAMILY SET domain 17 305 IPR046341 -
Arst10g03511 312 Gene3D SET domain 2 293 IPR046341 -
Arst10g03511 312 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 9 301 - -
Arst10g03511 312 ProSiteProfiles Post-SET domain profile. 292 308 IPR003616 -
Arst10g03511 312 ProSiteProfiles SET domain profile. 134 285 IPR001214 GO:0005515
Arst10g03511 312 Pfam SET domain 145 285 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03511 Arst-Chr10 103239041 103241669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03511 112 307 C2H2 Transcription Factor Family AT2G23740 30.542 2.05e-18 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst10g03511 SET 2.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03511 K11433 - gmx:100786871 427.943