Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03508 ATGGCTCCCTCTAACTATCAACAAAACAAGCATTCTCCTTCTAGTTCTACTGTCATCCGTTTCTTTAAGATTATCGTCAGAGAAAGTCTTCAAGATGAAAACTTTATGTTACCAAAAAAGTTCACCAGAAAATATGGTTCTGGCCTATCAAACCCACTATATCTTAAGCCTCCAGATGGAACTGAATGGAGAGTAGATTGGACCAATCGTAATGGTAGAACTTTGTTTAAAAGAGGTTGGAAAGAGTTTGTTGCATATTACTCTCTTGATCATGGCCATGTGTTATGGTTTGAGTATAATATTGGAACTTCTCACATTGAAGTAGAAATATTTGACATGAGTTGCCTCGAAATAGAGTATCCTGCCAATGATCAGATCAAAAAGCACCCGCCACAACACAGGGGCCAGTCGGTGAAAAGGCCAAAAGAACAACAAACTAGAGACGTGGATAACAGTCCCAACACTCAAAACATGAGACTTAACGAGGGACGGCAGAAGAAAAGATTAAATGAACCACTGTCAGGAGGAGTCCGGGGCCAACCGAGGAAAAAACTGAGAGCACCAGTATCATCTGCTTCTAAAGGTAGACAGTTGGAAAATGACGCACAAATCAGGAAAGGTAAAAGTAATAGAAGAAGAAAAGATTCTGAATCTTCTGTTAGGCCCTATCCTGCAAAACCTGAATCTCTGAAAGAAGCTAACAAGTTCAAGTGGGAAAAGCCCTCTTTCATCATCAAGATAAAGCAACTGTCTCAAACAAAAGCACCATGTTACTTTTCAACTAAATTCTTCCGGAAGTATTTTGAAAATAATCCACAAAATGCAAATATAAGGTTTGGAAAGAAGTTGTTCCCTGTTAAGTTGATCTATAGGCCATCATCATGTAATGCCTTTATCTCTGCTGGTTGGAACTTTTTTGCTCGAGCTAGTAAATTACAAGCCGGAGATGTTTGTTTGTTTAAGCTCGTCAACAGAAAAGATCCCGTGCTTGATGTTCATATTTGTCGTCGACAACGTCGCGAGTCACTTTCCAAACCAGTGACTCGTGGAATTCAGCTCCTGAAAGAAGTTAAGGAGCTCAATTCACAGAATCCCTCTTTCATGGTTAAGATAAAAGACAGTGATCCAAGAAGATCAAGGCCTAATTTATCAGCTATCTTCTACAGAAAATATTTTAAAAAGAATCAGCAGAATGTAAAGTTACAGTTCGGAAAGGAGATGTGGCCTGTTACGATAATCTACAATCCGTCGTCAAGAAACACCTTTATTTCGGCTGGTTGGAGCTCTTTTGCTAGAGCAAGTAAATTAGAAACTGGAGATGTTTGTGTTTTTGAGCTCATCAATGAAAAAGATCTATTTAATGTTCATATCTGTAGAGTTCAATGCTAG 1389 0.388 MAPSNYQQNKHSPSSSTVIRFFKIIVRESLQDENFMLPKKFTRKYGSGLSNPLYLKPPDGTEWRVDWTNRNGRTLFKRGWKEFVAYYSLDHGHVLWFEYNIGTSHIEVEIFDMSCLEIEYPANDQIKKHPPQHRGQSVKRPKEQQTRDVDNSPNTQNMRLNEGRQKKRLNEPLSGGVRGQPRKKLRAPVSSASKGRQLENDAQIRKGKSNRRRKDSESSVRPYPAKPESLKEANKFKWEKPSFIIKIKQLSQTKAPCYFSTKFFRKYFENNPQNANIRFGKKLFPVKLIYRPSSCNAFISAGWNFFARASKLQAGDVCLFKLVNRKDPVLDVHICRRQRRESLSKPVTRGIQLLKEVKELNSQNPSFMVKIKDSDPRRSRPNLSAIFYRKYFKKNQQNVKLQFGKEMWPVTIIYNPSSRNTFISAGWSSFARASKLETGDVCVFELINEKDLFNVHICRVQC 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03508 462 ProSiteProfiles B3 DNA-binding domain profile. 284 338 IPR003340 GO:0003677
Arst10g03508 462 SUPERFAMILY DNA-binding pseudobarrel domain 360 460 IPR015300 -
Arst10g03508 462 ProSiteProfiles B3 DNA-binding domain profile. 408 461 IPR003340 GO:0003677
Arst10g03508 462 MobiDBLite consensus disorder prediction 199 221 - -
Arst10g03508 462 SMART B3_2 367 461 IPR003340 GO:0003677
Arst10g03508 462 SMART B3_2 21 114 IPR003340 GO:0003677
Arst10g03508 462 SMART B3_2 243 338 IPR003340 GO:0003677
Arst10g03508 462 SUPERFAMILY DNA-binding pseudobarrel domain 237 337 IPR015300 -
Arst10g03508 462 Gene3D - 14 115 IPR015300 -
Arst10g03508 462 CDD B3_DNA 258 336 IPR003340 GO:0003677
Arst10g03508 462 CDD B3_DNA 20 112 IPR003340 GO:0003677
Arst10g03508 462 MobiDBLite consensus disorder prediction 125 147 - -
Arst10g03508 462 CDD B3_DNA 365 459 IPR003340 GO:0003677
Arst10g03508 462 Pfam B3 DNA binding domain 381 460 IPR003340 GO:0003677
Arst10g03508 462 Pfam B3 DNA binding domain 21 112 IPR003340 GO:0003677
Arst10g03508 462 Pfam B3 DNA binding domain 257 338 IPR003340 GO:0003677
Arst10g03508 462 MobiDBLite consensus disorder prediction 125 228 - -
Arst10g03508 462 SUPERFAMILY DNA-binding pseudobarrel domain 17 121 IPR015300 -
Arst10g03508 462 ProSiteProfiles B3 DNA-binding domain profile. 20 114 IPR003340 GO:0003677
Arst10g03508 462 Gene3D - 351 461 IPR015300 -
Arst10g03508 462 Gene3D - 225 339 IPR015300 -
Arst10g03508 462 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 356 460 IPR044837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03508 Arst-Chr10 103205359 103208710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03508 354 452 B3 DNA Binding Superfamily AT3G18990 33.000 2.44e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g03508 B3 5.2e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03508 - - adu:107471893 753.436