Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03507 ATGGCTCCCTCTAACTATCAACAAAACAAGCATTCTCCTTCTAGTTCTACTGTCATCCGTTTCTTTAAGATTATCGTCAGAGAAAGTCTTCAAGATGAAAACTTTATGTTACCAAAAAAGTTCACCAGAAAATATGGTTCTGGCCTATCAAACCCACTATATCTTAAGCCTCCAGATGGAACTGAATGGAGAGTAGATTGGACCAATCGTAATGGTAGAACTTTGTTTAAAAGAGGTTGGAAAGAGTTTGTTGCATATTACTCTCTTGATCATGGCCATGTGTTATGGTTTGAGTATAATATTGGAACTTCTCACATTGAAGTAGAAATATTTGACATGAGTTGCCTCGAAATAGAGTATCCTGCCAATGATCAGATCAAAAAGCACCCGCCACAACACAGGGGCCAGTCGGTGAAAAGGCCAAAAGAACAACAAACTAGAGACGTGGATAACAGTCCCAACACTCAAAACATGAGACTTAACGAGGGACGGCAGAAGAAAAGATTAAATGAACCACTGTCAGGAGGAGTCCGGGGCCAACCGAGGAAAAAACTGAGAGCACCAGTATCATCTGCTTCTAAAGGTAGACAGTTGGAAAATGACGCACAAATCAGGAAAGGTATTAAATCTGAAAAGAAAAACCATAAGATGACAGTGTCTGTCAATCAAGATTCTAATGGTAAAAGTAATAGAAGAAGAAAAGATTCTGAATCTTCTGTTAGGCCCTATCCTGCAAAACCTGAATCTCTGAAAGAAGCTAACAAGTTCAAGTGGGAAAAGCCCTCTTTCATCATCAAGATAAAGCAACTGTCTCAAACAAAAGCACCATGTTACTTTTCAACTAAATTCTTCCGGAAGTATTTTGAAAATAATCCACAAAATGCAAATATAAGGTTTGGAAAGAAGTTGTTCCCTGTTAAGTTGATCTATAGGCCATCATCATGTAATGCCTTTATCTCTGCTGGTTGGAACTTTTTTGCTCGAGCTAGTAAATTACAAGCCGGAGATGTTTGTTTGTTTAAGCTCGTCAACAGAAAAGATCCCGTGCTTGATGTTCATATTTGTCGTCGACAACGTCGCGAGTCACTTTCCAAACCAGTGACTCGTGGAATTCAGCTCCTGAAAGAAGTTAAGGAGCTCAATTCACAGAATCCCTCTTTCATGGTTAAGATAAAAGACAGTGATCCAAGAAGATCAAGGCCTAATTTATCAGCTATCTTCTACAGAAAATATTTTAAAAAGAATCAGCAGAATGTAAAGTTACAGTTCGGAAAGGAGATGTGGCCTGTTACGATAATCTACAATCCGTCGTCAAGAAACACCTTTATTTCGGCTGGTTGGAGCTCTTTTGCTAGAGCAAGTAAATTAGAAACTGGAGATGTTTGTGTTTTTGAGCTCATCAATGAAAAAGATCTATTTAATGTTCATATCTGTAGAGTTCAATGCTAG 1449 0.3844 MAPSNYQQNKHSPSSSTVIRFFKIIVRESLQDENFMLPKKFTRKYGSGLSNPLYLKPPDGTEWRVDWTNRNGRTLFKRGWKEFVAYYSLDHGHVLWFEYNIGTSHIEVEIFDMSCLEIEYPANDQIKKHPPQHRGQSVKRPKEQQTRDVDNSPNTQNMRLNEGRQKKRLNEPLSGGVRGQPRKKLRAPVSSASKGRQLENDAQIRKGIKSEKKNHKMTVSVNQDSNGKSNRRRKDSESSVRPYPAKPESLKEANKFKWEKPSFIIKIKQLSQTKAPCYFSTKFFRKYFENNPQNANIRFGKKLFPVKLIYRPSSCNAFISAGWNFFARASKLQAGDVCLFKLVNRKDPVLDVHICRRQRRESLSKPVTRGIQLLKEVKELNSQNPSFMVKIKDSDPRRSRPNLSAIFYRKYFKKNQQNVKLQFGKEMWPVTIIYNPSSRNTFISAGWSSFARASKLETGDVCVFELINEKDLFNVHICRVQC 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03507 482 SUPERFAMILY DNA-binding pseudobarrel domain 17 121 IPR015300 -
Arst10g03507 482 SUPERFAMILY DNA-binding pseudobarrel domain 380 480 IPR015300 -
Arst10g03507 482 ProSiteProfiles B3 DNA-binding domain profile. 428 481 IPR003340 GO:0003677
Arst10g03507 482 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 376 480 IPR044837 -
Arst10g03507 482 SUPERFAMILY DNA-binding pseudobarrel domain 257 357 IPR015300 -
Arst10g03507 482 Gene3D - 14 115 IPR015300 -
Arst10g03507 482 CDD B3_DNA 278 356 IPR003340 GO:0003677
Arst10g03507 482 MobiDBLite consensus disorder prediction 125 248 - -
Arst10g03507 482 CDD B3_DNA 20 112 IPR003340 GO:0003677
Arst10g03507 482 MobiDBLite consensus disorder prediction 125 147 - -
Arst10g03507 482 CDD B3_DNA 385 479 IPR003340 GO:0003677
Arst10g03507 482 Gene3D - 371 481 IPR015300 -
Arst10g03507 482 Gene3D - 244 359 IPR015300 -
Arst10g03507 482 ProSiteProfiles B3 DNA-binding domain profile. 20 114 IPR003340 GO:0003677
Arst10g03507 482 ProSiteProfiles B3 DNA-binding domain profile. 304 358 IPR003340 GO:0003677
Arst10g03507 482 MobiDBLite consensus disorder prediction 199 218 - -
Arst10g03507 482 SMART B3_2 387 481 IPR003340 GO:0003677
Arst10g03507 482 SMART B3_2 263 358 IPR003340 GO:0003677
Arst10g03507 482 SMART B3_2 21 114 IPR003340 GO:0003677
Arst10g03507 482 MobiDBLite consensus disorder prediction 227 241 - -
Arst10g03507 482 Pfam B3 DNA binding domain 401 480 IPR003340 GO:0003677
Arst10g03507 482 Pfam B3 DNA binding domain 21 112 IPR003340 GO:0003677
Arst10g03507 482 Pfam B3 DNA binding domain 277 358 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03507 Arst-Chr10 103205359 103208710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03507 374 472 B3 DNA Binding Superfamily AT3G18990 33.000 2.08e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g03507 B3 5.6e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03507 - - adu:107471893 789.26