Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03506 ATGGCTTCCTCTATTTCCTCTGATATCCGTTTTTTCAAGATTGGTCTCAGAAAAAGCCTTGAAGATGGAAACCTTAAGTTACCAAAAAAGTTCAGTAAGAAATATGGTGATGGTGTTCCAAATCCAGTGTATCTGAAGCCTCCAGATGGCACTGCATGGAAGATAGATTGGTCTTTGTATGACGGTGTGATTCAATTTGAAAATGGTTGGAACGAATTTGCTTCATATTACTCTTTGGATAATGGCCATCTGCTGTGTTTTGCGTACAATGAAACTTCTAACATTGAAGTACAAATTTTTGACATCATTGATGGCTTTGAAATAAAGTATCCTTCCTTGGATCACATCGGCGATGACAATTCGATTGAGATCTTGAATGAACTGCCGCCACGAGGCTGGCCGAGCATAAAACTGAAAGCAGCAGCAGAAGTATCATCTCCGTCTACAAGTAAAATATTGAGGAGTTCTGTCAAAACTGGAGATGTAGAAAAGGGCCCTGATAAACAAAACTGGATGCAGTGTTGCAAGAATGAAGAAGCTAGTTAA 546 0.3938 MASSISSDIRFFKIGLRKSLEDGNLKLPKKFSKKYGDGVPNPVYLKPPDGTAWKIDWSLYDGVIQFENGWNEFASYYSLDNGHLLCFAYNETSNIEVQIFDIIDGFEIKYPSLDHIGDDNSIEILNELPPRGWPSIKLKAAAEVSSPSTSKILRSSVKTGDVEKGPDKQNWMQCCKNEEAS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03506 181 Gene3D - 4 102 IPR015300 -
Arst10g03506 181 Pfam B3 DNA binding domain 18 101 IPR003340 GO:0003677
Arst10g03506 181 ProSiteProfiles B3 DNA-binding domain profile. 10 103 IPR003340 GO:0003677
Arst10g03506 181 CDD B3_DNA 10 101 IPR003340 GO:0003677
Arst10g03506 181 PANTHER B3 DOMAIN-CONTAINING 6 156 - -
Arst10g03506 181 MobiDBLite consensus disorder prediction 151 181 - -
Arst10g03506 181 SMART B3_2 11 103 IPR003340 GO:0003677
Arst10g03506 181 SUPERFAMILY DNA-binding pseudobarrel domain 5 101 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03506 Arst-Chr10 103182794 103184263 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03506 10 124 B3 DNA Binding Superfamily AT4G01580 36.134 1.09e-14 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g03506 B3 1.6e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03506 - - adu:107471745 350.903