Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03505 ATGGTTATTAACATCATATTCATAACGCTGCAGAAGTTACCAAAAAAGTTCACTAGAAAATATGGTTCTGACCTATCAAACCCATTGTATCTTAAGCCTCCGGATGGTACTGAATGGAGAGTAGATTGGATCATTCATGATGGTGGAATTTTGTTTAAAGAAGGTTGGAAAGAGTTTGTTGCATATTACTCTCTTGATGATGGCCATGTGTTATGGTTTGAGTATAATATTGGAACTTCTCGCATTGAAGTACAAATATCTGACATGAGTGGCCTCCAAATAGAGTATCCTGTCAATGATCAGATCAAAGAGCACCCGCCACAACACAGGGGCGAGCCGGTGGAAAGGCCAAAAGAACAACAAACTAGAGATGTGGATAGCAGTCCCAACACTCAAAACATGAGATTTAACGAGGTACGGCAAGAAAAGATTGAATGA 438 0.3973 MVINIIFITLQKLPKKFTRKYGSDLSNPLYLKPPDGTEWRVDWIIHDGGILFKEGWKEFVAYYSLDDGHVLWFEYNIGTSRIEVQISDMSGLQIEYPVNDQIKEHPPQHRGEPVERPKEQQTRDVDSSPNTQNMRFNEVRQEKIE 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03505 145 MobiDBLite consensus disorder prediction 97 145 - -
Arst10g03505 145 Pfam B3 DNA binding domain 12 86 IPR003340 GO:0003677
Arst10g03505 145 SMART B3_2 6 90 IPR003340 GO:0003677
Arst10g03505 145 SUPERFAMILY DNA-binding pseudobarrel domain 11 90 IPR015300 -
Arst10g03505 145 MobiDBLite consensus disorder prediction 102 123 - -
Arst10g03505 145 Gene3D - 7 91 IPR015300 -
Arst10g03505 145 CDD B3_DNA 13 88 IPR003340 GO:0003677
Arst10g03505 145 ProSiteProfiles B3 DNA-binding domain profile. 1 90 IPR003340 GO:0003677
Arst10g03505 145 PANTHER B3 DOMAIN-CONTAINING 12 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03505 Arst-Chr10 103180192 103180629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03505 1 100 B3 DNA Binding Superfamily AT1G49475 34.000 9.46e-13 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst10g03505 B3 1.1e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03505 - - ahf:112717085 194.512