Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03484 ATGAAGATAGCACTTGAGCGGAATTTTACCCGGGGACGTAAATCAGAGCAAGTGCAGGCTGCTTGTCTTTATATTGCATTCCGGGAAAATAATAAGCCATACCTTCTCATTGATTTTTCAAATTATTTAAGGATAAATGTTTATGTTCTAGGTGCAGTTTTTTTACAGCTGTGTAAAGTATTAAGGCTCGAAGAGCACCCAATTGTTCAGAAGCCTGTTGATCCCAGTCTTTTTATTTATAAATACACAAATAATTTGTTAAAGGAAAGGAACTTGGTTGTCTCTGAAACTGCGCTGAGTATTATTGCTAGCATGAAACGTGACTGGATGCAGACAGGGAGAAAGCCAAGCGGATTATGTGGTGCAGCATTATATATGTCTGCTCTTGCAAATGGTTTTAAGTGCTCTAAGTCAGACATTCTAAGAATCGTCCATATATGTGAAGCAACTTTGACTAAGCGGTTGGTAGAGTTTGAGAATACAGAGTCTGCTAGCTTGACAATTGAGGAGTTGCATACAATGGCAAAAGAGCATGAAAAGCAGCCAATTAAGGTACCAAATGGTGAATTGAACAAATGTACTTCCGAAGATCTACTATGTGAGCACAAGGGTACTGCTGTGCCTTATTTTGCACTTGGACTGTGTGAAACATGTTACAAGGATTTTGATAAACTCTCTGGTGGACTTGATGGTGGCTTGGATCCTCCTGCTTTCCAGCGTGCTGAGAGGGAGAGAAGGGCAAAATCAGATTCTGAGGAAAGTGCCAATAGAACAGATGATATGGTGAAAGCATCAAATGGTGAACATGGAAGCCAAAAAGAGGGATTACATGCCTCAGAGCCAAAAAGTGTTGGAGATAACTATGAGCACACAGCCACTCAAGATGGCAACCTTGATGAATCACATGAAGATGATACGAAGACTAAAACTCATGATGAATCAGAAAGTTTATCTGATATTGATGATCTAGAGGTTGATAGCTACCTTCACAATGAGGAGGAAAAACATTACAAGAAGATTATATGGGAAAATATGAATCGAGAATATCTTGAGGAACAAGCAGCTAAGGAAGCAGCTGCTGCTGCTGCTAAGAAATTTGCCGAGGCAAATTGTTCCGAAGAGGAGCTAGCAGCAAGAGAATTTGCGAAATCGGCTGCTGATGCTGTGGCAAAGTCCAGAAAGGAAATGAGACAAAAACGAGCTCAAGAGGCCAAAAATTCTGGTCCTGCTCAATCTGCTATAGAGGCCACCCGGCAGATGTTGAGAACAAAGAGGCTCAGCTCCAAAGTCAATTATGATCGCTTAGAAAAGCTATTTGGTGATCCTGTATCTACAGAAAATCCCAAGAAAGTACGATTTGATCCATCTTTGGACAACGATGAAAATAAAGAATCCAAATTAGAGGGAAAACTAAAGGATGATGATGCAGTAGGAATAGAAGATGAAGTTGAGGATGGTGACATGACTGGAGAATATGAAGATAATATGTATCAGGAAAATGGAGATGAGGCATATGAGGATGAATATTATGACGATGGTGATTATTGA 1548 0.4012 MKIALERNFTRGRKSEQVQAACLYIAFRENNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIYKYTNNLLKERNLVVSETALSIIASMKRDWMQTGRKPSGLCGAALYMSALANGFKCSKSDILRIVHICEATLTKRLVEFENTESASLTIEELHTMAKEHEKQPIKVPNGELNKCTSEDLLCEHKGTAVPYFALGLCETCYKDFDKLSGGLDGGLDPPAFQRAERERRAKSDSEESANRTDDMVKASNGEHGSQKEGLHASEPKSVGDNYEHTATQDGNLDESHEDDTKTKTHDESESLSDIDDLEVDSYLHNEEEKHYKKIIWENMNREYLEEQAAKEAAAAAAKKFAEANCSEEELAAREFAKSAADAVAKSRKEMRQKRAQEAKNSGPAQSAIEATRQMLRTKRLSSKVNYDRLEKLFGDPVSTENPKKVRFDPSLDNDENKESKLEGKLKDDDAVGIEDEVEDGDMTGEYEDNMYQENGDEAYEDEYYDDGDY 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03484 515 MobiDBLite consensus disorder prediction 293 316 - -
Arst10g03484 515 MobiDBLite consensus disorder prediction 392 414 - -
Arst10g03484 515 Pfam Brf1-like TBP-binding domain 318 439 IPR011665 -
Arst10g03484 515 Gene3D - 74 167 - -
Arst10g03484 515 MobiDBLite consensus disorder prediction 478 515 - -
Arst10g03484 515 Gene3D Single helix bin 309 360 - -
Arst10g03484 515 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 2 430 IPR000812 GO:0006352|GO:0070897
Arst10g03484 515 CDD CYCLIN_TFIIIB90_rpt2 71 161 - -
Arst10g03484 515 Gene3D - 1 66 - -
Arst10g03484 515 Pfam Transcription factor TFIIB repeat 2 58 IPR013150 GO:0017025
Arst10g03484 515 Pfam Transcription factor TFIIB repeat 71 160 IPR013150 GO:0017025
Arst10g03484 515 MobiDBLite consensus disorder prediction 230 324 - -
Arst10g03484 515 SUPERFAMILY Cyclin-like 2 64 IPR036915 -
Arst10g03484 515 MobiDBLite consensus disorder prediction 437 515 - -
Arst10g03484 515 MobiDBLite consensus disorder prediction 447 477 - -
Arst10g03484 515 FunFam Transcription factor IIIB subunit 74 163 - -
Arst10g03484 515 SUPERFAMILY Cyclin-like 73 169 IPR036915 -
Arst10g03484 515 MobiDBLite consensus disorder prediction 237 267 - -
Arst10g03484 515 FunFam Cyclin/Brf1-like TBP-binding protein 310 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03484 Arst-Chr10 103052461 103062618 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03484 4 424 Inorganic Solute Cotransporters AT2G01280 40.888 1.52e-84 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03484 K15196 - gmx:100789154 599.742