Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03482 ATGGTGTATTGTGATCACTGTGTCCAAAATGTTAGTGCGTTGAGAACTGATTATGGTTCTTTATGTTGTGGCACATGTGGTAAGGTGTTGCAAGATTATCTTTTTTCTGAAGAGGCCACATTTGTGAAAAATTCATCTGGACAGAGCCAATTATCTGGCCATTATGTCAGAACAATTCAAAGCGAATTCTCTGCCTCACGTCAAAGGACTATAGATAGAGCTTTTGAGGAGATCAAATACTTAAGTTATGGCCTTGGAGTGAACGATGATAACATGACCGTGCAAGCTGTGGCCTTTTATAGAATAGCACTTGAGCGGAATTTTACCCGGGGACGTAAATCAGAGCAAGTGCAGGCTGCTTGTCTTTATATTGCATTCCGGGAAAATAATAAGCCATACCTTCTCATTGATTTTTCAAATTATTTAAGGATAAATGTTTATGTTCTAGGTGCAGTTTTTTTACAGCTGTGTAAAGTATTAAGGCTCGAAGAGCACCCAATTGTTCAGAAGCCTGTTGATCCCAGTCTTTTTATTTATAAATACACAAATAATTTGTTAAAGGAAAGGAACTTGGTTGTCTCTGAAACTGCGCTGAGTATTATTGCTAGCATGAAACGTGACTGGATGCAGACAGGGAGAAAGCCAAGCGGATTATGTGGTGCAGCATTATATATGTCTGCTCTTGCAAATGGTTTTAAGTGCTCTAAGTCAGACATTCTAAGAATCGTCCATATATGTGAAGCAACTTTGACTAAGCGGTTGGTAGAGTTTGAGAATACAGAGTCTGCTAGCTTGACAATTGAGGAGTTGCATACAATGGCAAAAGAGCATGAAAAGCAGCCAATTAAGGTACCAAATGGTGAATTGAACAAATGTACTTCCGAAGATCTACTATGTGAGCACAAGGGTACTGCTGTGCCTTATTTTGCACTTGGACTGTGTGAAACATGTTACAAGGATTTTGATAAACTCTCTGGTGGACTTGATGGTGGCTTGGATCCTCCTGCTTTCCAGCGTGCTGAGAGGGAGAGAAGGGCAAAATCAGATTCTGAGGAAAGTGCCAATAGAACAGATGATATGGTGAAAGCATCAAATGGTGAACATGGAAGCCAAAAAGAGGGATTACATGCCTCAGAGCCAAAAAGTGTTGGAGATAACTATGAGCACACAGCCACTCAAGATGGCAACCTTGATGAATCACATGAAGATGATACGAAGACTAAAACTCATGATGAATCAGAAAGTTTATCTGATATTGATGATCTAGAGGTTGATAGCTACCTTCACAATGAGGAGGAAAAACATTACAAGAAGATTATATGGGAAAATATGAATCGAGAATATCTTGAGGAACAAGCAGCTAAGGAAGCAGCTGCTGCTGCTGCTAAGAAATTTGCCGAGGCAAATTGTTCCGAAGAGGAGCTAGCAGCAAGAGAATTTGCGAAATCGGCTGCTGATGCTGTGGCAAAGTCCAGAAAGGAAATGAGACAAAAACGAGCTCAAGAGGCCAAAAATTCTGGTCCTGCTCAATCTGCTATAGAGGCCACCCGGCAGATGTTGAGAACAAAGAGGCTCAGCTCCAAAGTCAATTATGATCGCTTAGAAAAGCTATTTGGTGATCCTGTATCTACAGAAAATCCCAAGAAAGTACGATTTGATCCATCTTTGGACAACGATGAAAATAAAGAATCCAAATTAGAGGGAAAACTAAAGGATGATGATGCAGTAGGAATAGAAGATGAAGTTGAGGATGGTGACATGACTGGAGAATATGAAGATAATATGTATCAGGAAAATGGAGATGAGGCATATGAGGATGAATATTATGACGATGGTGATTATTGA 1845 0.4005 MVYCDHCVQNVSALRTDYGSLCCGTCGKVLQDYLFSEEATFVKNSSGQSQLSGHYVRTIQSEFSASRQRTIDRAFEEIKYLSYGLGVNDDNMTVQAVAFYRIALERNFTRGRKSEQVQAACLYIAFRENNKPYLLIDFSNYLRINVYVLGAVFLQLCKVLRLEEHPIVQKPVDPSLFIYKYTNNLLKERNLVVSETALSIIASMKRDWMQTGRKPSGLCGAALYMSALANGFKCSKSDILRIVHICEATLTKRLVEFENTESASLTIEELHTMAKEHEKQPIKVPNGELNKCTSEDLLCEHKGTAVPYFALGLCETCYKDFDKLSGGLDGGLDPPAFQRAERERRAKSDSEESANRTDDMVKASNGEHGSQKEGLHASEPKSVGDNYEHTATQDGNLDESHEDDTKTKTHDESESLSDIDDLEVDSYLHNEEEKHYKKIIWENMNREYLEEQAAKEAAAAAAKKFAEANCSEEELAAREFAKSAADAVAKSRKEMRQKRAQEAKNSGPAQSAIEATRQMLRTKRLSSKVNYDRLEKLFGDPVSTENPKKVRFDPSLDNDENKESKLEGKLKDDDAVGIEDEVEDGDMTGEYEDNMYQENGDEAYEDEYYDDGDY 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03482 614 MobiDBLite consensus disorder prediction 329 423 - -
Arst10g03482 614 Pfam Transcription factor TFIIB repeat 69 157 IPR013150 GO:0017025
Arst10g03482 614 Pfam Transcription factor TFIIB repeat 170 259 IPR013150 GO:0017025
Arst10g03482 614 MobiDBLite consensus disorder prediction 546 576 - -
Arst10g03482 614 MobiDBLite consensus disorder prediction 536 614 - -
Arst10g03482 614 Gene3D - 173 266 - -
Arst10g03482 614 SUPERFAMILY Cyclin-like 74 163 IPR036915 -
Arst10g03482 614 CDD CYCLIN_TFIIIB90_rpt2 170 260 - -
Arst10g03482 614 MobiDBLite consensus disorder prediction 577 614 - -
Arst10g03482 614 FunFam Transcription factor IIIB 90 kDa subunit 63 166 - -
Arst10g03482 614 FunFam Transcription factor IIIB subunit 173 262 - -
Arst10g03482 614 Gene3D Single helix bin 408 459 - -
Arst10g03482 614 MobiDBLite consensus disorder prediction 392 415 - -
Arst10g03482 614 MobiDBLite consensus disorder prediction 491 513 - -
Arst10g03482 614 SUPERFAMILY Cyclin-like 172 268 IPR036915 -
Arst10g03482 614 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 2 529 IPR000812 GO:0006352|GO:0070897
Arst10g03482 614 MobiDBLite consensus disorder prediction 336 366 - -
Arst10g03482 614 FunFam Cyclin/Brf1-like TBP-binding protein 409 459 - -
Arst10g03482 614 PRINTS Transcription initiation factor IIB signature 119 138 IPR000812 GO:0006352|GO:0070897
Arst10g03482 614 PRINTS Transcription initiation factor IIB signature 213 229 IPR000812 GO:0006352|GO:0070897
Arst10g03482 614 PRINTS Transcription initiation factor IIB signature 16 36 IPR000812 GO:0006352|GO:0070897
Arst10g03482 614 Pfam Brf1-like TBP-binding domain 417 538 IPR011665 -
Arst10g03482 614 CDD CYCLIN_TFIIIB90_rpt1 70 160 - -
Arst10g03482 614 Gene3D - 64 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03482 Arst-Chr10 103052461 103063544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03482 1 523 Inorganic Solute Cotransporters AT2G01280 39.773 1.93e-106 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03482 K15196 - gmx:100789154 746.888