Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03480 ATGAGTGGTGCTGGGAACATGTCTGATAATAAGGATCCGGGTATCATGCTCTTTGGCATGAAGATTCCTTTGCCGGAATTTCAGATTCCAGCCAGCTCTCAAATGGGTTGTCAAATTCAGGCAAACTTTGCAGCCATGAATTCTTGCAGCAACCTGAAGAAGACAGAAGTAGAAACTCAATCTGCTCAAAACTCTGAGCAAGAAAAGAATACTTGCGGATCAAGCTACAGCAAACAAGAATCCAAGAACACTGAGGAAGGAAATGAGGAGAGTAGTAACACAGATCAAGAAAGAAGTTTCAAGAAGCCAGAAAAGATTCTTCAGTGTCCACGCTGCAACAGCTTGGAGACAAAGTTTTGTTATTTCAACAACTACAATGTCAATCAACCGCGGCACTTCTGCAAGAACTGTCAAAGATATTGGACTGCTGGTGGCACGATGAGGAATGTTCCGGTCGGAGCCGGAAGGCGGAAGAATAAGCATCTGGCCTCTCAATTCAGACACATAATAGTATCGGAGGGAACTCCGGCCGCAAGGTTAGAACCAAGAGAAGATTCATCTGGTAACAATGGTTCTGTATTGAAATTTGGTCCAGATGTTCCTCTCTGTGAATCCATGGAGTCAATGCTTAGTCTTCGAGATCAGAAGCCAAATGTTGATGCAGCAAGCTCAGCGAATTCTTATTTTCAAAATGAATCGTTAGAACAAAAGTGTTACTCTATTCCTCAATTTTCTTGGAATCCGGGTTGGAATAATGGTGGTTCTCCGGTGCCTTTGACTTTTCCGGCAACGATGAGGGGAGTTCCAACCATTTCGCCACCGAATATTCCGTTGCAATTTGTTCCTGGAAGTTTCTGGAACAGAACACAAGTGTGGCCTTCACAAACCGCCGCAGTTTCAATAGGATCCAACGGTTGTCTTTCACCCTCTTCCTCTACTACAAGTAACAGTTGCTGCTCCGGCAATGGCTCTCCGACGCTCGGAAAACACACCAGAGATAGTAATGTCTTCATTGACGACGAGAAATCGGAGATATGTGTTTTGGTTCCAAAGACACTTAGAATTGATGGCCCAAATGAGGCTTCAAGAAAGCACTTGTATGAATCAGAAAATGGTGTTTCGAAAAAGGTCGAACAAAAAGGACAAGGCAAAGAGCGTGTATTAGGTGTGTCTCAAATCTTGGAAGCTAACCCTGCAGCAGTTTCTCGTGTTCATGCATTTCAAGAGAGCACACAATGA 1239 0.4391 MSGAGNMSDNKDPGIMLFGMKIPLPEFQIPASSQMGCQIQANFAAMNSCSNLKKTEVETQSAQNSEQEKNTCGSSYSKQESKNTEEGNEESSNTDQERSFKKPEKILQCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKHLASQFRHIIVSEGTPAARLEPREDSSGNNGSVLKFGPDVPLCESMESMLSLRDQKPNVDAASSANSYFQNESLEQKCYSIPQFSWNPGWNNGGSPVPLTFPATMRGVPTISPPNIPLQFVPGSFWNRTQVWPSQTAAVSIGSNGCLSPSSSTTSNSCCSGNGSPTLGKHTRDSNVFIDDEKSEICVLVPKTLRIDGPNEASRKHLYESENGVSKKVEQKGQGKERVLGVSQILEANPAAVSRVHAFQESTQ 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03480 412 MobiDBLite consensus disorder prediction 58 81 - -
Arst10g03480 412 ProSiteProfiles Zinc finger Dof-type profile. 107 161 IPR003851 GO:0003677|GO:0006355
Arst10g03480 412 ProSitePatterns Zinc finger Dof-type signature. 109 145 IPR003851 GO:0003677|GO:0006355
Arst10g03480 412 Pfam Dof domain, zinc finger 105 161 IPR003851 GO:0003677|GO:0006355
Arst10g03480 412 PANTHER CYCLIC DOF FACTOR 2 7 411 IPR045174 GO:0003700|GO:0006355
Arst10g03480 412 MobiDBLite consensus disorder prediction 58 102 - -
Arst10g03480 412 MobiDBLite consensus disorder prediction 82 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03480 Arst-Chr10 103048068 103050500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03480 12 411 C2C2-Dof Transcription Factor Family AT5G39660 35.124 9.39e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst10g03480 zf-Dof 4.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03480 - - aip:107621760 768.844