Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03447 ATGGTACTAATTGTTCATCTTCATCTTCCCTGGGTACTACTCAACTTCATCCTATTACTAATATTGGTTGTCCTCTGCACTTTATCAGATTGTTACGACCCTTTGGATCCAAATGGCAACATTTCAATTACTTTTGATATTTACCAACGCACACAAGATGGATATTTGGCAAGGGTGACACTTGAAAACTACTACCAGTACCGGCATGTAGACAAACCAGGTTGGCAACTTGGATGGCAATGGGCTAATGATGAAGTTATATGGTCAATAAAGGGTGCAGTTGCAACAGATCAAGGCAACTGTTCTTCTTACACATCTCAGTTACCACATTCTTGCAAGAAAGATCCTCTCATAGTTGATCTTCCGGCCGATGTGTCACCAGAGAGCAGGTCAGAACACTGCTGCAATGGCGGCATCCTCTCGGCTCGAGCCATCAATCCTTTGAGCTCATTCACCTTGTTTGAGCTTGAAGTACGCAACTTAGGGCAATACCCTCTAGGACAAGCACCTAATAACCTCACACTCTTGGCCCCTGGTCCTGGCTATACTTGTTCCCCTCTTCTTCAGACTGATCCCACTGTCATCTCCTCTTTTAATGGACAAAGACAAGTTCCTGCTCTCAGAACGTGGAAGTCAGCATGTACATACTCCAACTTTATGGCAAATAAGTCACCAATATGCTGTGTATCGCTCTCAACATTTTACAACCCTATGATCACACCATGCCCTGATTGCAGCTGTGGATGCAGTGAAGCAGACAAAGCTTCTAAGTCTTGCATAAGGTTGGGTAATACCATATCAGAGGAGAACATAATAGCATGCACTAAGCACATGTGCCCAATTCGAGTTCATTGGCATGTTAAGAACAACTATGTAACTCACTGGAGGGTGAAGCTTACCATTTCTAACTACAATTATAGGAGCAACTACTCTAACTGGAATGTGCTTCTCCAACATCCTGCCTTCTCCCAGAATACAACTTCTTATAGTTTCAACACTGCCAAACTTCCCCTTGCCTTTCAAGATGGAGTTTCTCTGTTTTGGGGGATTGATTATTATAACACAGAACTAGTGCATTCGGATAAGGATCAACAAGGTTTTGTGTCAACAGAGATACTATTAGAGAAAGATCCAAAATCTTTTACATTGAGTAATGGATGGGCTTTTCCTAGGAGGGTCTATTTCAATGGAGAGAACTGTGAAATGCCCTTACCTGACACATTCCCTATGCTTCCAAATCATACCAACACTTTGAGACCTCCCAATATTATTTTACTCATCATCTCTTTATTCTGTTTCTGGACCAAAGCTTCCTTTCATTTTCAGTAG 1329 0.4206 MVLIVHLHLPWVLLNFILLLILVVLCTLSDCYDPLDPNGNISITFDIYQRTQDGYLARVTLENYYQYRHVDKPGWQLGWQWANDEVIWSIKGAVATDQGNCSSYTSQLPHSCKKDPLIVDLPADVSPESRSEHCCNGGILSARAINPLSSFTLFELEVRNLGQYPLGQAPNNLTLLAPGPGYTCSPLLQTDPTVISSFNGQRQVPALRTWKSACTYSNFMANKSPICCVSLSTFYNPMITPCPDCSCGCSEADKASKSCIRLGNTISEENIIACTKHMCPIRVHWHVKNNYVTHWRVKLTISNYNYRSNYSNWNVLLQHPAFSQNTTSYSFNTAKLPLAFQDGVSLFWGIDYYNTELVHSDKDQQGFVSTEILLEKDPKSFTLSNGWAFPRRVYFNGENCEMPLPDTFPMLPNHTNTLRPPNIILLIISLFCFWTKASFHFQ 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03447 442 Pfam COBRA-like protein 55 217 IPR006918 GO:0010215|GO:0016020
Arst10g03447 442 PANTHER PROTEIN COBRA 19 423 IPR006918 GO:0010215|GO:0016020
Arst10g03447 442 PIRSF COBRA 3 439 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03447 Arst-Chr10 102835061 102837132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03447 30 430 COBRA Gene Family AT3G29810 47.087 8.83e-135 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03447 - - vra:106760500 626.32