Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03440 ATGGAACAAAAAACAGCTACCTCCAACAACGTCTTAATTGACCCAAGCAACGGTTTCAACCGCGCTACCAGAACATTCCACAGCCTAAAACCCCCTCTCCGCCTCCCTCCTTCACATGCCACCGTCTCCGCACCATCATACGTTCTCTCTCTCCGTCGCAACTCACCTTGGTCCGACTCCGTCACCGCTCTCATCGACTCTGCCACCGGCCGCCACCTCTCCTACGCCGATTTCATCCGCCGTTCGGAAACCCTAGCTGCCAACCTTACATCCCTCTTCACACTCTCCAAAAACGACACCGCTTTGGTCCTCTCTCCAAACCTCCTCCACGTTCCTATCCTCCACTTCGCGCTCCTCTCCCTCGGCGTCGTTGTTTCGCCGGCAAATCCACTTGCCACGCGCTCCGATCTCACGCGCTTCATCCGCCTTAGCAAACCTACCATCGCATTCGCCACGTCATCAGCGGCTAACAACCTTCCCAATGAGTTCCGTCACGGAACCGTCCTCATCGACTCGCCCGAGTTCGAATCGCTCATGACAGCGAGTCGACCCGGCGCCAAACTCGAACAAGTGGAGGTGAGTCAGTCTGACGTGGCAGCTATTCTTTACTCTTCAGGAACCACAGGGAATGTGAAGGGAGTGATGCTGACTCACCGGAACCTGATTGCAATGGCAGGGGTATACGACGTCGTTCGGCCGCAGAGGGAGAAGCCCGCGGTGTTCCTATATACGGTGCCGTTTTTCCACGTGTTCGGGTTTACGCTCTCGCTGAGGGCGGTGGTGCTGTTGGAAACGGTGGTGTTAATGGAGAGATTCGGATTGAGGAGGATGATGGAGGCGATAGAGAGGTTTCGAGTTACGCACATGGCGGCGGTGCCGTCAATAATGGTAGCGATGATGAAAGACGACCTGACGGCGGCTTATGATTTAAGGTCGTTGGAATGCGTCTCTTGCGGCGGGGCTCCTCTCGGAAAGGATACCGCCGCGGCGTTCAAAACAAAGTTTCCCAAAGTGTTAATCTTGCAGGGATACGGTCTAACGGAGTCAACGGCAGGGGTTGCCCGAACAACGAATCCGGAGGAGGCAAGCCGATCAAGGACAACAGGTAAGCTGGTGTCAGGTGTTGAGGCTAAAATTGTAAATCCAGACACAGGGGAGCCCATGTTTCCTGGTGATCAAGGGGAACTTTGGCTCAGAGGACCTTCAATTATGAAAGGTTATGTTGGTGACCCAGAAGCAACTTTAGCAAGCTTGGTGGATGGGTGGTTAAGGACTGGGGACCTCTGCTATTTCGATGAAGAGGGTTTCCTCTATGTCGTTGACAGGTTGAAAGAGTTGATCAAATATAAAGGCTACCAGGTGGCCCCTGCAGAATTAGAACAAGTGCTCCATTCGCACCCTGAGATAAGCGATGCGGCAGTTATTCCATATCCTGATGAAGAAGCTGGTCAAGTCCCCATGGCCTTTGTGGTAAGAAAGCCCCAAAGTTCCCTTGGTGAAGCAGAAATAATTGAATTTGTTGCTAAGCAGGTTGCACCATACAAGAAAATAAGACGTGTAACATTTGTTGACTCCATACCAAAGAATGCAGTGGGGAAAATTCTAAGGAAAGATTTAAATAAAATTGCTCTTGAAAGATATATCTCTAGGCTATAA 1656 0.5163 MEQKTATSNNVLIDPSNGFNRATRTFHSLKPPLRLPPSHATVSAPSYVLSLRRNSPWSDSVTALIDSATGRHLSYADFIRRSETLAANLTSLFTLSKNDTALVLSPNLLHVPILHFALLSLGVVVSPANPLATRSDLTRFIRLSKPTIAFATSSAANNLPNEFRHGTVLIDSPEFESLMTASRPGAKLEQVEVSQSDVAAILYSSGTTGNVKGVMLTHRNLIAMAGVYDVVRPQREKPAVFLYTVPFFHVFGFTLSLRAVVLLETVVLMERFGLRRMMEAIERFRVTHMAAVPSIMVAMMKDDLTAAYDLRSLECVSCGGAPLGKDTAAAFKTKFPKVLILQGYGLTESTAGVARTTNPEEASRSRTTGKLVSGVEAKIVNPDTGEPMFPGDQGELWLRGPSIMKGYVGDPEATLASLVDGWLRTGDLCYFDEEGFLYVVDRLKELIKYKGYQVAPAELEQVLHSHPEISDAAVIPYPDEEAGQVPMAFVVRKPQSSLGEAEIIEFVAKQVAPYKKIRRVTFVDSIPKNAVGKILRKDLNKIALERYISRL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03440 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 20 541 - -
Arst10g03440 551 FunFam 4-coumarate--CoA ligase 2 445 546 - -
Arst10g03440 551 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Arst10g03440 551 SUPERFAMILY Acetyl-CoA synthetase-like 60 545 - -
Arst10g03440 551 ProSitePatterns Putative AMP-binding domain signature. 201 212 IPR020845 -
Arst10g03440 551 Gene3D - 445 547 IPR045851 -
Arst10g03440 551 Pfam AMP-binding enzyme 61 449 IPR000873 -
Arst10g03440 551 Gene3D - 36 444 IPR042099 -
Arst10g03440 551 CDD 4CL 36 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03440 Arst-Chr10 102800299 102805704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03440 5 551 Monolignol Biosynthesis Gene Families AT5G63380 52.566 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03440 K01904 - gmx:100801143 750.74