Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03439 ATGGGAGATGAAAGCAATTGCAGCATGAACATGGAAGAAGAAGTTCAAGGCGTTGAAGAAAGAGATCCAGAAAGCAACTCCAATACCAATAACACTCCCAATCCATTACACGAGCCACTTCTCAAGAGAAACAGAACTCTCTCTTCCAATCCACTCGCTCTCGTTGGCGCCAAAGTTTCCTACATAGAAAGCTTGGACTACGAGATCAATGAGAATGATCTGTTCAAGCAAGATTGGAGAACAAGGTCAAGAGCTCAGGTGTTGCAGTACATATTCTTGAAATGGTCGCTCGCGTTTCTTGTTGGTCTTCTCACCGGCGTCATCGCCACTCTCATCAATCTTGCCATTGAGAACATTGCAGGATACAAACTTCTTGCCGTCGTTCAGTACATCCACAAAGAAAGGTACATGGCAGGTTTTCTATATTTCACGGGTGTTAATTTCCTATTAACGTTCGTTGCTGCAATTCTCTGTGTGTGTTTTGCACCAACAGCAGCTGGGCCTGGAATACCAGAAATCAAAGCTTATCTTAATGGTGTTGATACTCCCAACATGTACGGTGCCACAACATTGTTTGTCAAGATTATTGGAAGCATTGGAGCTGTTGCTGCAGGGCTAGATTTAGGAAAAGAAGGGCCATTGGTACATATTGGAAGCTGCATTGCTTCCTTGTTAGGCCAAGGAGGCCCTGACAACTACCGGATCAAGTGGCGGTGGCTGCGATACTTTAACAACGACCGCGACCGCCGTGATCTGATTACCTGCGGCGCATCTTCGGGTGTTTGTGCGGCTTTCAGGGCTCCTGTAGGCGGAGTCCTGTTTGCTCTTGAAGAGGTGGCAACTTGGTGGAGAAGTGCATTGCTTTGGAGAACTTTCTTCAGCACTGCTGTGGTGGTGGTTATTCTAAGAGCTTTCATTGAACTGTGCCATGAAGGGAAGTGTGGTCTTTTTGGTGAAGGAGGGCTTATAATGTTTGATGTGAGCAATGTTAGTGTGAGTTACCATGTTATGGATATTATCCCTGTTGCCTTAATTGGAGTCATTGGAGGCGTTTTGGGAAGCCTTTATAACCATGTTCTCCACAAGGTCCTCAGGCTCTACAATCTCATTAATCAGAAAGGGAAGATTTATAAGCTGCTACTGAGTCTTTCAGTAGCATTGTTCACATCAGCATGCCAATATGGTCTGCCATTCCTTGCCAAATGCAGTCCTTGTGATCCATCGCTTCCAAAATCCATTTGCCCCACCAACGGAAGGTCTGGAAATTACAAACAATTCAACTGCCCAGACGGGCACTACAATGATCTTGCGACTCTGCTCCTGACCACCAACGACGACGCCGTTCGAAACATATTCTCTTCCAACACACCTAATGAATTCCAGCCATCCTCTATCCTAATCTTCTTTGCACTCTATTGCATCTTAGGACTAGTCACCTTCGGCATAGCCGTCCCCTCCGGCCTCTTCCTTCCCATAATTCTCATGGGCTCCGGCTACGGCCGCCTTCTCGCCATGCTCATGGGGCCTCACACAAACATTGATCATGGATTGTTTGCCGTTCTCGGCGCAGCCTCGCTTATGGCCGGTTCCATGAGGATGACTGTCTCACTCTGTGTCATCTTTCTCGAATTAACCAACAACCTTCTTTTACTCCCAATCACCATGTTTGTTCTCTTGATAGCCAAAACAGTTGGGGACAGTTTCAACCCAAGCATCTATGAGATCATTTTGCACCTTAAAGGCCTCCCTTTCATGGATTCAAACCCGGAGCCATGGATGAGGAACCTAACAGTGGGAGAGCTTGTTGATGTGAAGCCAGCAGTGGTTACTCTCCGAGGGGTAGAGAAAGTCTGCAACATTGTTGAAGCGTTGAGGAACACAACTCATAACGGTTTCCCTGTGGTGGATGATGGGGTGGTGCCGCCGACGAGGCTTGTAACGGAAGCAAGAGAACTGCATGGAATGATCCTGAGAGCACATCTGATCCAAGTGCTGAAGAAGAGGTGGTTCTTGAAGGAGGCAAGGAGGAGAGAGGAATGGGAGGTGAGGGAGAAGTTTACATGGGTTGAGCTTGCAGAGAGAGAAGGGAAGATTGAAGAGGTGGCTATAACAAGAGATGAAATGGAGATGTATGTTGATCTTCATCCTCTTACTAACACAACTCCTTTTACGGTTTTGGAGAGTATGTCAGTTGCCAAAGCCATGGTTCTCTTCAGGCAAGTTGGACTACGACATCTTCTTGTTGTACCCAAGTATCAAGCATCCGGGGTATCTCCTGTAATTGGAATATTGACAAGGCAGGATCTACTAGCACACAATATATTGTCAGTGTTTCCTCATCTTGCAAAATCAAAAAAGAGGAACTGA 2367 0.4647 MGDESNCSMNMEEEVQGVEERDPESNSNTNNTPNPLHEPLLKRNRTLSSNPLALVGAKVSYIESLDYEINENDLFKQDWRTRSRAQVLQYIFLKWSLAFLVGLLTGVIATLINLAIENIAGYKLLAVVQYIHKERYMAGFLYFTGVNFLLTFVAAILCVCFAPTAAGPGIPEIKAYLNGVDTPNMYGATTLFVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIKWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVILRAFIELCHEGKCGLFGEGGLIMFDVSNVSVSYHVMDIIPVALIGVIGGVLGSLYNHVLHKVLRLYNLINQKGKIYKLLLSLSVALFTSACQYGLPFLAKCSPCDPSLPKSICPTNGRSGNYKQFNCPDGHYNDLATLLLTTNDDAVRNIFSSNTPNEFQPSSILIFFALYCILGLVTFGIAVPSGLFLPIILMGSGYGRLLAMLMGPHTNIDHGLFAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMFVLLIAKTVGDSFNPSIYEIILHLKGLPFMDSNPEPWMRNLTVGELVDVKPAVVTLRGVEKVCNIVEALRNTTHNGFPVVDDGVVPPTRLVTEARELHGMILRAHLIQVLKKRWFLKEARRREEWEVREKFTWVELAEREGKIEEVAITRDEMEMYVDLHPLTNTTPFTVLESMSVAKAMVLFRQVGLRHLLVVPKYQASGVSPVIGILTRQDLLAHNILSVFPHLAKSKKRN 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03439 788 CDD CBS_pair_voltage-gated_CLC_euk_bac 605 772 - -
Arst10g03439 788 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 22 776 - -
Arst10g03439 788 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 22 776 - -
Arst10g03439 788 PRINTS Chloride channel signature 258 277 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst10g03439 788 PRINTS Chloride channel signature 163 180 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst10g03439 788 PRINTS Chloride channel signature 194 213 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst10g03439 788 PRINTS Chloride channel signature 572 586 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst10g03439 788 PRINTS Chloride channel signature 484 504 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst10g03439 788 PRINTS Chloride channel signature 516 532 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst10g03439 788 PRINTS Chloride channel signature 534 553 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst10g03439 788 PRINTS Plant CLC chloride channel signature 436 452 IPR002251 GO:0005247|GO:0006821|GO:0016020
Arst10g03439 788 PRINTS Plant CLC chloride channel signature 279 287 IPR002251 GO:0005247|GO:0006821|GO:0016020
Arst10g03439 788 PRINTS Plant CLC chloride channel signature 293 303 IPR002251 GO:0005247|GO:0006821|GO:0016020
Arst10g03439 788 PRINTS Plant CLC chloride channel signature 68 76 IPR002251 GO:0005247|GO:0006821|GO:0016020
Arst10g03439 788 PRINTS Plant CLC chloride channel signature 311 318 IPR002251 GO:0005247|GO:0006821|GO:0016020
Arst10g03439 788 SUPERFAMILY CBS-domain pair 588 771 IPR046342 -
Arst10g03439 788 ProSiteProfiles CBS domain profile. 718 784 IPR000644 -
Arst10g03439 788 MobiDBLite consensus disorder prediction 22 40 - -
Arst10g03439 788 SUPERFAMILY Clc chloride channel 72 587 IPR014743 -
Arst10g03439 788 Pfam CBS domain 720 770 IPR000644 -
Arst10g03439 788 FunFam Chloride channel ClC3 86 403 - -
Arst10g03439 788 SMART cbs_1 721 774 IPR000644 -
Arst10g03439 788 SMART cbs_1 607 666 IPR000644 -
Arst10g03439 788 Pfam Voltage gated chloride channel 151 565 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Arst10g03439 788 CDD ClC_6_like 63 585 - -
Arst10g03439 788 Gene3D - 588 777 IPR046342 -
Arst10g03439 788 Gene3D Clc chloride channel 86 587 - -
Arst10g03439 788 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03439 Arst-Chr10 102786533 102791223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03439 19 785 Ion Channels AT3G27170 79.140 0.0 1239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03439 K05016 - gmx:778094 1330.85