Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03340 ATGTTTCCTTCCACTACTTACAGTTACAGCACTGGCCCTTACCCTTGCTTCCCTTCATCTTCTTCTTCGTATCCTCTTTTTCCTTTTCTCAACCCTGAGAACAATGCTTCTTCTTCTTCTGCAACAACCGCCACTAACAACAACAACAACAATAATCTCCTTCATGATCCATCGCTCTGCGTTCCTTACATTCCAATCCCTGAAGCACTAACCAATTTGGCAACAGTTGTAGATAACACTACTAATCTTGCTGCATCTTCATCAATGCCCAAACAACAGGACCTCAACGGTGGCGGTGGCGGAGGTGCTCATCATCACTTCGGCATATCCAGTTTGCTCACGAAGAAACCGGCGGCGGCGAAGAAAGATAGGCACAGCAAGATTTACACCGCTCAGGGGCTGAGGGACCGAAGGGTGAGGCTGTCGATCGAGATCGCGCGCAAGTTCTTCGATCTCCAAGACATGCTAGGGTTTGATAAGGCCAGCAACACGCTCGACTGGCTCTTCACCAAGTCCAAGAAAGCCATTAAGGAGCTTGCCAGGAGCAAGAACCACAGCGCCAGTGACGAAGCCGAAGCCGGTGCCGGCGCCGGTGCCAATAACAAGAGTTTCGCCTCGTCTTCTGACTGCGACGAAAATGACTTTGAAGTACTTTCTAGAAACAACCACCACCGCCACCAACAAGGGTCAGATGCCAGGGAGAGGAAGCTGAAAAATGCACAACAGAAAGAAGCAAGTGCTTGTAATGTGAGGGCAAAGATGAAGGAGTCAAGGGAGAAAGCAAGAGCAAGAGCAAGAGAAAGGACTAGTAACAAGATGTGTAACAGCATAATGGGAAATTCTTCTTCTTCTTCCGGGAAGGTTCTAGAATTAAAGAAAAGATGCCCTGCACCTAGTGAAAACCCTCACCACCTAGGTGGTGCTGAAGTTTCACAAACTAGAGATGACTTCAACGTTATTGAGGAATCCATTGTGATCAAGAGGAAGTTAAAGCAGCCATCTATGATGTCATCCTCACATCACCATCACCATCACCACCACCAATTAAACCTTCCCATCCCTAACAATAATAAGGAAGCAAGTTTCAACAACAACAGCGATAATTACCATCCAGGAAACTACACCAATTTGTCACCAAATTGGGATAATGCTAATGGACCAGCCTCAACGGCTAATAACCGCTCCAACTTCTGTGCAATAGCCAGCATGAATCTCTCTACAGGGCTACAAATCTTTGGAAAGTCATGGGAGGAATGCACCAATCCATCACGTCTGCACTAG 1281 0.4699 MFPSTTYSYSTGPYPCFPSSSSSYPLFPFLNPENNASSSSATTATNNNNNNNLLHDPSLCVPYIPIPEALTNLATVVDNTTNLAASSSMPKQQDLNGGGGGGAHHHFGISSLLTKKPAAAKKDRHSKIYTAQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELARSKNHSASDEAEAGAGAGANNKSFASSSDCDENDFEVLSRNNHHRHQQGSDARERKLKNAQQKEASACNVRAKMKESREKARARARERTSNKMCNSIMGNSSSSSGKVLELKKRCPAPSENPHHLGGAEVSQTRDDFNVIEESIVIKRKLKQPSMMSSSHHHHHHHHQLNLPIPNNNKEASFNNNSDNYHPGNYTNLSPNWDNANGPASTANNRSNFCAIASMNLSTGLQIFGKSWEECTNPSRLH 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03340 426 ProSiteProfiles R domain profile. 255 272 IPR017888 -
Arst10g03340 426 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 52 379 IPR005333 GO:0003700
Arst10g03340 426 Pfam TCP family transcription factor 120 275 IPR017887 -
Arst10g03340 426 MobiDBLite consensus disorder prediction 221 256 - -
Arst10g03340 426 ProSiteProfiles TCP domain profile. 121 179 IPR017887 -
Arst10g03340 426 MobiDBLite consensus disorder prediction 182 205 - -
Arst10g03340 426 MobiDBLite consensus disorder prediction 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03340 Arst-Chr10 102045877 102047619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03340 119 274 TCP Transcription Factor Family AT1G67260 44.231 5.18e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Arst10g03340 TCP 6e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03340 - - gmx:100801549 331.257