Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03326 ATGAGTGAAACCACAACTCCTCCTCCCACCAATAGTGAATTTGGAATTGGACAAGAACAACTGTGTTCGTTATCAACAGAGCAAAGTACTGCTGCTCTCGAGCTCTACGGAGGGGTTGTAGGAATATCGAATTTGCTGAATACCAGTTTAGCGAAAGGAATTCATGGTGATGAGGCTGATTTATTAAGACGAAGAAGGGCTTTCGGTTCTAACAATTATCCTCGATGGAGACGAAAAGGTTTTCTGATATTTGTATGGGAAGCTTGCAAAGATCCTACCTTGCTTATTTTACTGGTATCTGCAGCGATTTTATTGGCATTAGGGATAAAGTCTAAGGGTGTCAAGGAAGGATGGTACGATGGGGGAAGCATAGCTTTTGCTGCTTTTATTGTCATTGTAGTTACAGCCATGAGTGAATACAGGCAGTATGTTCAATTTCACGACACAAATGAAAAGAAGAGAAATATACACCTAGAGGTGATTAGAGGCGGGAGAAGGGTTAAGATCTCAATTTATGATATTGTCGTTGGCGATGTTATACCCCTTAATATTGGTGACCAGGTCCCAGCTGATGGAATTCTAATCACTCCTCACCCTCTTGCAATTGATGAATCAAGCATTCATGGGGAGAGCATAATTGTTCATAAAGATTCTAGGGCCCCTTTCTTGATGTCTGGATGTAGAGTTCAAGATGGTAGTGGCACTATGCTGGTAATAGGTGTTGGCATTAATACTGAGTGGGGGTTACAAATGGCTATTTCTTCAGATGACCCAATTGAAGAAACACCTTTGCAGGCTCGTCTAAATGGTGTAGCCACCTTTTTTGGTATTGTTGGTCTCTCTGTCACAGCTGTTATTCTGACGGTACTGCTGGCCAGATACTTCACTGGCCATACCAGAAACTTAGATGGGAATGTTCAATTTATAGCGGGCAAGACTAGAGCTGTTGATGCTATACATGGAGCAGTTAGCATAGTAACAATTGCGGTCACCAGTATAGTGGTTGCAGTACCTGACAGCCTCCCATTAACAGTCAACTTCACGTTAGCCTTCTCATTAAGGAAACTGATGGCATCTAAGATTTTGGTGAGGAAGCTTTTTGCTTGCGAGATGATGGGCTCTGCCACAGTTATTTGTAGTGACAAGACTGGTACATTGACTATGAATCAGATGATTGTGGTTGAGGCATATGCTGGTGGTAGAAAAATTGATCCTCCTAGCAACGGGTTAAGAATCTCTCCCAAGCTCCAATCGTTGCTCATTGAAGGTGTTGCACAAAACACTAATGGCAATGTTTACTTACCTGAGGGTTGCACTGGTATTGAGATTTCTGGATCACCAACAGAAAAGGCAATTTTACATTGGGGAGTACAGATTGGGATGGATTTCGAGGCTGCCAGATCAGAGTCTTCAATTATTCACATGTTTCCTTTCAATGCAGAGAAAAAACGTGGCGGAGTTGCAATACAGAAGGCTGACCATGAAATCCACATACATTGGAAAGGTGCTGCTGAGATAATTCTTGCTCGTTGTACATGGTACTTGGATACAAATGACCATTTGATGGAGATGAGTGGAGAGAAGATGGCATTTTTCAATCAAATTATTGAAGACATGGCTGCTAAAAGTCTTCGTTGTGTTGCTATTGCATATCGACCATGGAAAAAGGAGGACATTCCAGTCAATGAAGAACAATGGGCTCACTCGTCTATACTAGAAGATGATCTTATTTTGCTTGCTATTGTTGGTTTGAAGGATCCTTGTCGACCTGGAATAAAAACTACAGTGCAGCTTTGCCAAAAAGCTGGGGTTAAGGTGATAATGTTCACTGGTGACAACATCAATACTGCCAAAGCAATTGCTTTGGAATGTGGAATACTATCTTCCTTTGATAATGCTATAGAACCATGTGTCATTGAGGGAAGAGAATTCCGTGCCTTAACAGATGAACAAAGAGAAGAGATAGCTGAAAAAATAGTTGTTATGGGACGGTCAAGTCCTAATGACAAGTTATTACTTGCGGAAGCGCTCAGAAAGAGGGGACATATTATCGCTGTAATTGGGGATGGAACAAATGATGCTCCGGCACTATATGAGGCCGATGTAGGTCTTGCCATGGGTATACAGGGCTCACAAATTGCAATAGAAAGCTCTGATATCATACTTATGGATGACAACTTCCCTTCAATTTTGAAGGTTGTGAAATGGGGTCGATGTATATATGCTAACCTACGGAAATTTATCCAATTTAATCTTACAATAAGTGTGACAGCTCTTCTTATAAATGTTGTTGCTACACTCTCTTCTGGTGATATCCCACTAAATGCTGTGCAGCTTCTGTGGGTAAATCTTATCATGGATACTCTAGGAGCACTAGCATTGGCAACTGAACAACCAACAAATCTCCTGATGAATCTACCTCCAGTAGGCCGAAGAGAACCGCTAATCTCAAATACTATGTGGAGGAACATATTGATACAGGTAGTATATCAGGTGTCTGTCTTGCTCGCTTTAAACTTTCAAGGTAGCATTCCTGGTTTCACACATGATGCAACTGATCATGCAATTAAATTGAAGAGAACATTGATCTTCGATGCATTTGTACTATGTCAGATCTTCAATGAATTTAATGCAAGGAAGCTAGATGAATTCAACATATTTAAAGGAGTCACGAGATCTACCTCTTTATGGGAATAA 2697 0.4105 MSETTTPPPTNSEFGIGQEQLCSLSTEQSTAALELYGGVVGISNLLNTSLAKGIHGDEADLLRRRRAFGSNNYPRWRRKGFLIFVWEACKDPTLLILLVSAAILLALGIKSKGVKEGWYDGGSIAFAAFIVIVVTAMSEYRQYVQFHDTNEKKRNIHLEVIRGGRRVKISIYDIVVGDVIPLNIGDQVPADGILITPHPLAIDESSIHGESIIVHKDSRAPFLMSGCRVQDGSGTMLVIGVGINTEWGLQMAISSDDPIEETPLQARLNGVATFFGIVGLSVTAVILTVLLARYFTGHTRNLDGNVQFIAGKTRAVDAIHGAVSIVTIAVTSIVVAVPDSLPLTVNFTLAFSLRKLMASKILVRKLFACEMMGSATVICSDKTGTLTMNQMIVVEAYAGGRKIDPPSNGLRISPKLQSLLIEGVAQNTNGNVYLPEGCTGIEISGSPTEKAILHWGVQIGMDFEAARSESSIIHMFPFNAEKKRGGVAIQKADHEIHIHWKGAAEIILARCTWYLDTNDHLMEMSGEKMAFFNQIIEDMAAKSLRCVAIAYRPWKKEDIPVNEEQWAHSSILEDDLILLAIVGLKDPCRPGIKTTVQLCQKAGVKVIMFTGDNINTAKAIALECGILSSFDNAIEPCVIEGREFRALTDEQREEIAEKIVVMGRSSPNDKLLLAEALRKRGHIIAVIGDGTNDAPALYEADVGLAMGIQGSQIAIESSDIILMDDNFPSILKVVKWGRCIYANLRKFIQFNLTISVTALLINVVATLSSGDIPLNAVQLLWVNLIMDTLGALALATEQPTNLLMNLPPVGRREPLISNTMWRNILIQVVYQVSVLLALNFQGSIPGFTHDATDHAIKLKRTLIFDAFVLCQIFNEFNARKLDEFNIFKGVTRSTSLWE 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03326 898 Gene3D - 376 732 IPR023214 -
Arst10g03326 898 SUPERFAMILY Calcium ATPase, transmembrane domain M 38 897 IPR023298 -
Arst10g03326 898 NCBIfam HAD-IC family P-type ATPase 653 767 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst10g03326 898 PRINTS Sodium/potassium-transporting ATPase signature 498 516 - -
Arst10g03326 898 PRINTS Sodium/potassium-transporting ATPase signature 122 142 - -
Arst10g03326 898 PRINTS Sodium/potassium-transporting ATPase signature 372 393 - -
Arst10g03326 898 Gene3D - 87 883 - -
Arst10g03326 898 SMART Cation_ATPase_N_a_2 38 109 IPR004014 -
Arst10g03326 898 SFLD p-type atpase 361 740 IPR044492 -
Arst10g03326 898 SFLD p-type atpase 361 740 IPR044492 -
Arst10g03326 898 NCBIfam calcium-translocating P-type ATPase, PMCA-type 25 894 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Arst10g03326 898 PANTHER CATION TRANSPORTING ATPASE 5 893 - -
Arst10g03326 898 PANTHER CATION TRANSPORTING ATPASE 5 893 - -
Arst10g03326 898 FunFam Calcium-transporting ATPase 134 255 - -
Arst10g03326 898 Pfam Cation transporting ATPase, C-terminus 772 895 IPR006068 -
Arst10g03326 898 SFLD C1.7: P-type atpase like 361 740 - -
Arst10g03326 898 SFLD C1.7: P-type atpase like 361 740 - -
Arst10g03326 898 Gene3D - 60 255 - -
Arst10g03326 898 FunFam Phospholipid-transporting ATPase IC 376 388 - -
Arst10g03326 898 PRINTS P-type cation-transporting ATPase superfamily signature 580 591 - -
Arst10g03326 898 PRINTS P-type cation-transporting ATPase superfamily signature 711 723 - -
Arst10g03326 898 PRINTS P-type cation-transporting ATPase superfamily signature 203 217 - -
Arst10g03326 898 PRINTS P-type cation-transporting ATPase superfamily signature 602 612 - -
Arst10g03326 898 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Arst10g03326 898 PRINTS P-type cation-transporting ATPase superfamily signature 687 706 - -
Arst10g03326 898 Gene3D - 389 587 IPR023299 GO:0000166
Arst10g03326 898 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 584 IPR023299 GO:0000166
Arst10g03326 898 SUPERFAMILY Calcium ATPase, transduction domain A 157 248 IPR008250 -
Arst10g03326 898 FunFam Calcium-transporting ATPase 389 587 - -
Arst10g03326 898 Pfam Cation transporter/ATPase, N-terminus 38 103 IPR004014 -
Arst10g03326 898 SUPERFAMILY HAD-like 377 792 IPR036412 -
Arst10g03326 898 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Arst10g03326 898 Pfam E1-E2 ATPase 157 357 - -
Arst10g03326 898 FunFam Calcium-transporting ATPase 704 898 - -
Arst10g03326 898 Pfam haloacid dehalogenase-like hydrolase 377 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03326 Arst-Chr10 101826409 101926616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03326 1 893 Primary Pumps ATPases AT5G57110 63.099 0.0 1174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03326 K01537 - gmx:100792945 1280