Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03301 ATGAGAATAATAAACAAAGAATCTCCAACAATGGCGGTTGATGTCGTGAAGTGTAATTACATCAGAAAACGCAAAAGAGCATCATTGAAGCAAAAACTTCTTCTTAATGAGAGAGTTGAGGTAAGGAGTGTGGAAGATGGGTTTATGGGGTCATGGCACCCAGGTACAGTTATACATTGTGGCAAACAAAAGCGTCATGTGAGGTATGACAATGTATTGGAAGATGATGGATCAAGCCATGTTGTTGATGTGGTTGCTGTTTCACCTGTTGTGGATGGTGTTAGTGTTTCAGATTCTAATGTTGAGCGTGGCTACATTAGGCCAATGCCTCCGATGTTTGAATTTGGTGGATGGGACCTCCCATTTGGACTTTGTGTCGACGTAAGTTACCAAGAAGCATGGTGGGAAGGTGTTATCTTTGATCATTGCAATGGAATGGATGAGAGGAGGGTGTTCTTCCCTGATTTGGGTGATGAGATGAAAATTGGGATCCATCATTTGAGGATGACTCATGATTGGGATGAATTTGCCGATGATTGGAAGCCAAGGGGGAACTGGGTTTTTCTTGAATTGGTAGAGGAGTGTGAGAGGTTGTCCTATGTTGCTGTCTCAGTGAAGCAGATTTGGTATGATGTGAGGGTTAGGAAGGAGTTTGAGAACCTTATTAGGGATTGGACTTGTGATGAGAAGGAATTGTGGAGAGATCTTGTTCTGGAGGTAGCTGGTGACTACTATGCTCTCACATTGCAAGACATTTTGCCCGCATTAAAAATTGATTTCTTGGAAGAAACTCCAAGAACTGAGTTAGTTGAGACTACTGCTATTGCTGATAGTGATGATGTTCCCGCTATTGCATTTGGTTCTTGCACAGGAATAACTGATGTCTCTGAGAAGAAAGGTGACTCCGCAAATCTAATGGATTGTGATCAAAACACTGGTAGCATCGATCATATTCAAGAGGAAAACAATATAGATACTTTGAATACTGGGGCCTTTGACGAGCAAAATATGGGAGAGTTAAATGTGAATGTACCTGAGGAGGAAGATGTGAGGTCAAGAGAACCGATATCTTCAATTCAGCAAATATTTCCTGAAGATCAAAAGGAAACTTCCAGCCATAGACATGTTCGTTCATCTGTGCTTTGGAAACCTTTGGTGCTGTCAGAAGTTGAATTCTGTCCTGAGGTTATTAAGCAATACACACTTGGATGTGAGAGCAAGAGGGTTAGGGAACTCTTGAAGACAAAAGTGAGAAAACATCTTGCTTATATTGGATGGACAATTGAGGTGACTGAAGACAGGTATTTTGCTGGGCGATACAGATACAGATACAAGCCACCTGGTGAACAAGGCACAAAAGTTTACACTTCAATTGCCAAAGCTTGTAGATATATTAAGCAAAATGAACCTCTGGTGTCCCAAAATGACCCGGGTAGGATGCCTGATATGGTTGATAGTAGCATTCTACATCTTCTTTCTGATCAATCGCGTAGCAATCGGGTTGATGATGCTTATAATTCTATGGTGGCGTCTTCCTCTTCTGCGAAAGTTGCAGTTGAACCTGAATTTTGTCCAGAAGCTGTTGTGAAATATTACTTGCATGCATTAGAGAATCGCCATGCTGAGAAAAGGAAATGGAACTTGAAAGCAAAACAACATCTGTTAGCAGAAGGATGGGTTTTTGACTATCCAACTGAGAAACGGAGGAGAACATTGTACAAGTCTCCGAAAAATCAGACTTTGGGAACACTTCAAGGTGCTTGTAGGCTATACATTAAAGAAAGTATTCCCAAATGGACAAAATCCAGCATGAGACCTATGCATCTCTCTGTTGGTAATGAAGAAAGTGTTCATAGTGATGATCTATTATGTTGTGTCTCACAATTGGTTCAAAGGGAACCTGAATTACACAATGGTTTGCCAGTGAGTACTTCAAAAGGGAATGGGAATGAAAACAATCCTCGCTCGAAGAATTCAAAGAATAGCTCCCGAAAGCGCCATAGGAATGGAGTACCTACACGGGTGCTAAGATCAAGCAAAAGGGTGCAGAAAGTGCTTGCCCCTGGATTCTTACACCAAAAACCTCAAAATATTTTGTCTTGGTTAATAGATAACAACATCTTTTCGGCAAAGTGTAAGGTCTATTTCAGGGAAAAACGTGGCAAGAATTCAATCAAGGCTGAGGGGCGCATAGGTCGTGATGGAATCAAGTGTTGCTGTTGTCAAGAGATGTACAGTCTTTGTGGCTTTGCTAATCATGCTGGTTCCAATAGTAACCATAGACCTTCTGCTAGTATCTTCTTGAAAGACGGTCGCTCGCTACTGGATTGCCAGATTCAAGTAATGCATGAAAAAACGAAGGAGGAGAAAACGGAGAAACAATCAAATGATCTTTGTCGAGGCGAAAACGACAACATTTGTTCTGTGTGTCAATATGGGGGTGAACTTATCTTGTGTGATCAATGTCCTTCTGCATTTCATATTAGTTGTCTAGGTTTAGAGGTAATTCCTGGTGGTGACTGGTTTTGTCCATCATGTCGATGTGGAATTTGCAGCCAAATGAAGGGGGATGAGGGCAAACAATTTCTTAATTGCATTCAATGTGAACGTAAATATCATCTTGAGTGCTTGAGAAATAGAACAGTAGATAAATTAAGACGTATGGCAAAATGGTTCTGTGGAAACAAATGTGAACAGATATACACCAGCCTGCATAAACTATTAGGAAAACCAATTTCAGTGGATGCAGACAATCTAACTTGGACATTGATCAAGTCTGTTGACTCTGAGAATTGTGATGTTGGTTCTGCTAAAGACAAATACATGGCAGAGAATTACAGCAAACTCAATATTGCACTTTCTGTGATGCATGAATGCTTTGAGCCCCTACAGAACCCTTCCTCTAGCAGAGATCTCATGGAAGATGTCATATTCAGCAGATGGTCTCAGCTTAATAGAACGAATTTCCAGGGTTTCTACACTGTACTTCTTGAAAGAAATGAAGAACTGATAAGCGTGGCAACTTTTAGGGTGTATGGAGAGAAGGTCGCAGAAGTACCACTTGTAGGTACCAGATTTCAGTACCGTCGACTTGGAATGTGTCGCATTTTAATGAATGAACTTGAAAAGCTTGTCATCATTACAGATTCCACCCTGCTTCATTAG 3165 0.4098 MRIINKESPTMAVDVVKCNYIRKRKRASLKQKLLLNERVEVRSVEDGFMGSWHPGTVIHCGKQKRHVRYDNVLEDDGSSHVVDVVAVSPVVDGVSVSDSNVERGYIRPMPPMFEFGGWDLPFGLCVDVSYQEAWWEGVIFDHCNGMDERRVFFPDLGDEMKIGIHHLRMTHDWDEFADDWKPRGNWVFLELVEECERLSYVAVSVKQIWYDVRVRKEFENLIRDWTCDEKELWRDLVLEVAGDYYALTLQDILPALKIDFLEETPRTELVETTAIADSDDVPAIAFGSCTGITDVSEKKGDSANLMDCDQNTGSIDHIQEENNIDTLNTGAFDEQNMGELNVNVPEEEDVRSREPISSIQQIFPEDQKETSSHRHVRSSVLWKPLVLSEVEFCPEVIKQYTLGCESKRVRELLKTKVRKHLAYIGWTIEVTEDRYFAGRYRYRYKPPGEQGTKVYTSIAKACRYIKQNEPLVSQNDPGRMPDMVDSSILHLLSDQSRSNRVDDAYNSMVASSSSAKVAVEPEFCPEAVVKYYLHALENRHAEKRKWNLKAKQHLLAEGWVFDYPTEKRRRTLYKSPKNQTLGTLQGACRLYIKESIPKWTKSSMRPMHLSVGNEESVHSDDLLCCVSQLVQREPELHNGLPVSTSKGNGNENNPRSKNSKNSSRKRHRNGVPTRVLRSSKRVQKVLAPGFLHQKPQNILSWLIDNNIFSAKCKVYFREKRGKNSIKAEGRIGRDGIKCCCCQEMYSLCGFANHAGSNSNHRPSASIFLKDGRSLLDCQIQVMHEKTKEEKTEKQSNDLCRGENDNICSVCQYGGELILCDQCPSAFHISCLGLEVIPGGDWFCPSCRCGICSQMKGDEGKQFLNCIQCERKYHLECLRNRTVDKLRRMAKWFCGNKCEQIYTSLHKLLGKPISVDADNLTWTLIKSVDSENCDVGSAKDKYMAENYSKLNIALSVMHECFEPLQNPSSSRDLMEDVIFSRWSQLNRTNFQGFYTVLLERNEELISVATFRVYGEKVAEVPLVGTRFQYRRLGMCRILMNELEKLVIITDSTLLH 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03301 1054 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 849 902 IPR013083 -
Arst10g03301 1054 Pfam Agenet domain 37 111 IPR008395 -
Arst10g03301 1054 Pfam PHD-finger 806 848 IPR019787 -
Arst10g03301 1054 SMART PHD_3 806 847 IPR001965 -
Arst10g03301 1054 SMART PHD_3 848 898 IPR001965 -
Arst10g03301 1054 SUPERFAMILY FYVE/PHD zinc finger 848 895 IPR011011 -
Arst10g03301 1054 CDD PHD1_AIRE 807 846 - -
Arst10g03301 1054 Pfam Tify domain binding domain 729 780 IPR032308 -
Arst10g03301 1054 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 950 1044 IPR016181 -
Arst10g03301 1054 MobiDBLite consensus disorder prediction 636 675 - -
Arst10g03301 1054 SUPERFAMILY FYVE/PHD zinc finger 791 847 IPR011011 -
Arst10g03301 1054 CDD Tudor_Agenet_AtDUF_rpt1_3 37 111 - -
Arst10g03301 1054 ProSiteProfiles Zinc finger PHD-type profile. 804 849 IPR019787 -
Arst10g03301 1054 MobiDBLite consensus disorder prediction 641 657 - -
Arst10g03301 1054 PANTHER PHD FINGER PROTEIN 12 506 1045 IPR042163 GO:0003714|GO:0045892
Arst10g03301 1054 MobiDBLite consensus disorder prediction 659 674 - -
Arst10g03301 1054 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 798 848 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03301 Arst-Chr10 101607123 101613475 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03301 33 1044 PHD Transcription Factor Family AT5G58610 36.364 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst10g03301 Agenet 1.1e-15 CL0049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03301 - - adu:107471457 2072.36