Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03294 ATGGCGGTTGATGTCGTGAAGTGTAATTACATCAGAAAACGCAAAAGAGCATCATTGAAGCAAAAACTTCTTCTTAATGAGAGAGTTGAGGTAAGGAGTGTGGAAGATGGGTTTATGGGGTCATGGCACCCAGGTACAGTTATACATTGTGGCAAACAAAAGCGTCATGTGAGGTATGACAATGTATTGGAAGATGATGGATCAAGCCATGTTGTTGATGTGGTTGCTGTTTCACCTGTTGTGGATGGTGTTAGTGTTTCAGATTCTAATGTTGAGCGTGGCTACATTAGGCCAATGCCTCCGATGTTTGAATTTGGTGGATGGGACCTCCCATTTGGACTTTGTGTCGACGTAAGTTACCAAGAAGCATGGTGGGAAGGTGTTATCTTTGATCATTGCAATGGAATGGATGAGAGGAGGGTGTTCTTCCCTGATTTGGGTGATGAGATGAAAATTGGGATCCATCATTTGAGGATGACTCATGATTGGGATGAATTTGCCGATGATTGGAAGCCAAGGGGGAACTGGGTTTTTCTTGAATTGGTAGAGGAGTGTGAGAGGTTGTCCTATGTTGCTGTCTCAGTGAAGCAGATTTGGTATGATGTGAGGGTTAGGAAGGAGTTTGAGAACCTTATTAGGGATTGGACTTGTGATGAGAAGGAATTGTGGAGAGATCTTGTTCTGGAGGTAGCTGGTGACTACTATGCTCTCACATTGCAAGACATTTTGCCCGCATTAAAAATTGATTTCTTGGAAGAAACTCCAAGAACTGAGTTAGTTGAGACTACTGCTATTGCTGATAGTGATGATGTTCCCGCTATTGCATTTGGTTCTTGCACAGGAATAACTGATGTCTCTGAGAAGAAAGGTGACTCCGCAAATCTAATGGATTGTGATCAAAACACTGGTAGCATCGATCATATTCAAGAGGAAAACAATATAGATACTTTGAATACTGGGGCCTTTGACGAGCAAAATATGGGAGAGTTAAATGTGAATGTACCTGAGGAGGAAGATGTGAGGTCAAGAGAACCGATATCTTCAATTCAGCAAATATTTCCTGAAGATCAAAAGGAAACTTCCAGCCATAGACATGTTCGTTCATCTGTGCTTTGGAAACCTTTGGTGCTGTCAGAAGTTGAATTCTGTCCTGAGGTTATTAAGCAATACACACTTGGATGTGAGAGCAAGAGGGTTAGGGAACTCTTGAAGACAAAAGTGAGAAAACATCTTGCTTATATTGGATGGACAATTGAGGTGACTGAAGACAGGTATTTTGCTGGGCGATACAGATACAGATACAAGCCACCTGGTGAACAAGGCACAAAAGTTTACACTTCAATTGCCAAAGCTTGTAGATATATTAAGCAAAATGAACCTCTGGTGTCCCAAAATGACCCGGGTAGGATGCCTGATATGGTTGATAGTAGCATTCTACATCTTCTTTCTGATCAATCGCGTAGCAATCGGGTTGATGATGCTTATAATTCTATGGTGGCGTCTTCCTCTTCTGCGAAAGTTGCAGTTGAACCTGAATTTTGTCCAGAAGCTGTTGTGAAATATTACTTGCATGCATTAGAGAATCGCCATGCTGAGAAAAGGAAATGGAACTTGAAAGCAAAACAACATCTGTTAGCAGAAGGATGGGTTTTTGACTATCCAACTGAGAAACGGAGGAGAACATTGTACAAGTCTCCGAAAAATCAGACTTTGGGAACACTTCAAGGTGCTTGTAGGCTATACATTAAAGAAAGTATTCCCAAATGGACAAAATCCAGCATGAGACCTATGCATCTCTCTGTTGGTAATGAAGAAAGTGTTCATAGTGATGATCTATTATGTTGTGTCTCACAATTGGTTCAAAGGGAACCTGAATTACACAATGGTTTGCCAGTGAGTACTTCAAAAGGGAATGGGAATGAAAACAATCCTCGCTCGAAGAATTCAAAGAATAGCTCCCGAAAGCGCCATAGGAATGGAGTACCTACACGGGTGCTAAGATCAAGCAAAAGGGTGCAGAAAGTGCTTGCCCCTGGATTCTTACACCAAAAACCTCAAAATATTTTGTCTTGGTTAATAGATAACAACATCTTTTCGGCAAAGTGTAAGGTCTATTTCAGGGAAAAACGTGGCAAGAATTCAATCAAGGCTGAGGGGCGCATAGGTCGTGATGGAATCAAGTGTTGCTGTTGTCAAGAGATGTACAGTCTTTGTGGCTTTGCTAATCATGCTGGTTCCAATAGTAACCATAGACCTTCTGCTAGTATCTTCTTGAAAGACGGTCGCTCGCTACTGGATTGCCAGATTCAAGTAATGCATGAAAAAACGAAGGAGGAGAAAACGGAGAAACAATCAAATGATCTTTGTCGAGGCGAAAACGACAACATTTGTTCTGTGTGTCAATATGGGGGTGAACTTATCTTGTGTGATCAATGTCCTTCTGCATTTCATATTAGTTGTCTAGGTTTAGAGGTAATTCCTGGTGGTGACTGGTTTTGTCCATCATGTCGATGTGGAATTTGCAGCCAAATGAAGGGGGATGAGGGCAAACAATTTCTTAATTGCATTCAATGTGAACGTAAATATCATCTTGAGTGCTTGAGAAATAGAACAGTAGATAAATTAAGACGTATGGCAAAATGGTTCTGTGGAAACAAATGTGAACAGATATACACCAGCCTGCATAAACTATTAGGAAAACCAATTTCAGTGGATGCAGACAATCTAACTTGGACATTGATCAAGTCTGTTGACTCTGAGAATTGTGATGTTGGTTCTGCTAAAGACAAATACATGGCAGAGAATTACAGCAAACTCAATATTGCACTTTCTGTGATGCATGAATGCTTTGAGCCCCTACAGAACCCTTCCTCTAGCAGAGATCTCATGGAAGATGTCATATTCAGCAGATGGTCTCAGCTTAATAGAACGAATTTCCAGGGTTTCTACACTGTACTTCTTGAAAGAAATGAAGAACTGATAAGCGTGGCAACTTTTAGGGTGTATGGAGAGAAGGTCGCAGAAGTACCACTTGTAGGTACCAGATTTCAGTACCGTCGACTTGGAATGTGTCGCATTTTAATGAATGAACTTGAAAAGATGCTCACACAGCTAGGGGTGGAGAGGCTAGTTTTGCCTGCTGTTCCTGGTGTGCTCGAGACATGGACGAAATCTTTTGGCTTTGACCAGATGACAGAATTCCAAAGATCAGAGTTTCTGGACTACACTTTCCTAGATTTTCAAGGAGCCATCATGTGCCAAAAGCTATTGGGAAAGGAGAGTCAATCTCCGGATTCAGTTATAACAAGAGAGATCCAGCCAGCATCAGTCTCTGTTAAATGTAAAATTGATTTTGAAAAGTTCAGTTCTGGATCTGATGAAGTATACCAAGGAGAGGAAACTGATGAAAGTAGAATGACAGATGTACAAATGGTGGAGTACGTCTCGCCGTTGTCGACGATTAAACAAGAAAACAAATCTTAA 3483 0.412 MAVDVVKCNYIRKRKRASLKQKLLLNERVEVRSVEDGFMGSWHPGTVIHCGKQKRHVRYDNVLEDDGSSHVVDVVAVSPVVDGVSVSDSNVERGYIRPMPPMFEFGGWDLPFGLCVDVSYQEAWWEGVIFDHCNGMDERRVFFPDLGDEMKIGIHHLRMTHDWDEFADDWKPRGNWVFLELVEECERLSYVAVSVKQIWYDVRVRKEFENLIRDWTCDEKELWRDLVLEVAGDYYALTLQDILPALKIDFLEETPRTELVETTAIADSDDVPAIAFGSCTGITDVSEKKGDSANLMDCDQNTGSIDHIQEENNIDTLNTGAFDEQNMGELNVNVPEEEDVRSREPISSIQQIFPEDQKETSSHRHVRSSVLWKPLVLSEVEFCPEVIKQYTLGCESKRVRELLKTKVRKHLAYIGWTIEVTEDRYFAGRYRYRYKPPGEQGTKVYTSIAKACRYIKQNEPLVSQNDPGRMPDMVDSSILHLLSDQSRSNRVDDAYNSMVASSSSAKVAVEPEFCPEAVVKYYLHALENRHAEKRKWNLKAKQHLLAEGWVFDYPTEKRRRTLYKSPKNQTLGTLQGACRLYIKESIPKWTKSSMRPMHLSVGNEESVHSDDLLCCVSQLVQREPELHNGLPVSTSKGNGNENNPRSKNSKNSSRKRHRNGVPTRVLRSSKRVQKVLAPGFLHQKPQNILSWLIDNNIFSAKCKVYFREKRGKNSIKAEGRIGRDGIKCCCCQEMYSLCGFANHAGSNSNHRPSASIFLKDGRSLLDCQIQVMHEKTKEEKTEKQSNDLCRGENDNICSVCQYGGELILCDQCPSAFHISCLGLEVIPGGDWFCPSCRCGICSQMKGDEGKQFLNCIQCERKYHLECLRNRTVDKLRRMAKWFCGNKCEQIYTSLHKLLGKPISVDADNLTWTLIKSVDSENCDVGSAKDKYMAENYSKLNIALSVMHECFEPLQNPSSSRDLMEDVIFSRWSQLNRTNFQGFYTVLLERNEELISVATFRVYGEKVAEVPLVGTRFQYRRLGMCRILMNELEKMLTQLGVERLVLPAVPGVLETWTKSFGFDQMTEFQRSEFLDYTFLDFQGAIMCQKLLGKESQSPDSVITREIQPASVSVKCKIDFEKFSSGSDEVYQGEETDESRMTDVQMVEYVSPLSTIKQENKS 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03294 1160 CDD Tudor_Agenet_AtDUF_rpt1_3 27 101 - -
Arst10g03294 1160 Pfam Tify domain binding domain 719 770 IPR032308 -
Arst10g03294 1160 Pfam Acetyltransferase (GNAT) family 963 1061 IPR000182 GO:0016747
Arst10g03294 1160 Gene3D - 927 1093 - -
Arst10g03294 1160 Pfam Agenet domain 27 101 IPR008395 -
Arst10g03294 1160 MobiDBLite consensus disorder prediction 631 647 - -
Arst10g03294 1160 MobiDBLite consensus disorder prediction 649 664 - -
Arst10g03294 1160 SUPERFAMILY FYVE/PHD zinc finger 838 885 IPR011011 -
Arst10g03294 1160 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 929 1079 IPR000182 GO:0016747
Arst10g03294 1160 ProSiteProfiles Zinc finger PHD-type profile. 794 839 IPR019787 -
Arst10g03294 1160 SMART PHD_3 796 837 IPR001965 -
Arst10g03294 1160 SMART PHD_3 838 888 IPR001965 -
Arst10g03294 1160 SUPERFAMILY FYVE/PHD zinc finger 781 837 IPR011011 -
Arst10g03294 1160 CDD NAT_SF 985 1045 - -
Arst10g03294 1160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 788 838 IPR013083 -
Arst10g03294 1160 Pfam PHD-finger 796 838 IPR019787 -
Arst10g03294 1160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 839 892 IPR013083 -
Arst10g03294 1160 CDD PHD1_AIRE 797 836 - -
Arst10g03294 1160 PANTHER PHD FINGER PROTEIN 12 509 1138 IPR042163 GO:0003714|GO:0045892
Arst10g03294 1160 MobiDBLite consensus disorder prediction 626 665 - -
Arst10g03294 1160 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 943 1071 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03294 Arst-Chr10 101605822 101614310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03294 23 1038 PHD Transcription Factor Family AT5G58610 35.714 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst10g03294 Acetyltransf_1 0.00033 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03294 - - adu:107471457 2300.78