Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03293 ATGTCTTTTTCCTCTTGGGCCTCACCTGACACAAGATTGTTCATCAATGGGATTCTCATTCTCCCTTCAACTCTTCAATTCTCCTTCTTTCTCATTTTGAAACAACTCACTTTACTTTTGAGATCAATGGGGTTCTCAAGAACTGCAGAATCTACACTTCTTCTTGTGGCATTCTTCTGTCTTCTGAGATCTGCACATGCTTTACTTTCTCCCAAAGGAATCAACTTTGAAGTGCAAGCTTTAATGGCCATAAAAGCTTCTCTAGTGGACCCTCATGGCATTTTGGACAATTGGGATGGAGATGCAGTTGATCCATGTAGCTGGAACATGGTCACATGTTCTCCTCAGAGCTTTGTCATTAGCTTAGGAATTCCAAGTCAGAATTTATCTGGTACTCTATCACCAAGCATTGGAAACCTAACAAACCTTCAGAGTGTTGTGCTGCAAAATAATAACATAACTGGACCAATCCCTTCAGAGCTAGGCAAACTTTCCATGCTTCAAACACTTGATCTCTCCAATAACTTATTTAATGGGGAAATTCCTCAATCTCTTGGTCATCTCAGAACACTTCAGTACTTGAGGCTTAATAATAACAGTTTTTCTGGGGAGTGTCCTGTGTCAGTGGCTAACATGGCTCAGCTTTCTTTTCTTGACTTGTCCTACAATAATCTAAGTGGATCTGTACCAAGAATTTTGGCCAAATCATTCAGCATTGTTGGAAACCCCCTTGTATGCACAACAGCAAAAGAAACAAACTGCCATGGAATGACACTGATGCCTATGTCCATGGACTTAAACACTACTCAGAGTGCTTCACTATCAGGCACACAGAAAACTCACAAAATCGCCATCGCTTTCGGCTTAAGTCTTGGATGCCTCTCCTTTATAGCTCTTGTCTTTGGACTTGTTATATGGTGGAGGCACAAGCGCAATAAGCAGGCATTCTTTGATGTCAAAGACCGGCACCATGAAGAAGTGTACCTTGGAAACCTGAAGAGGTTCCAATTAAGAGAACTTGAGAATGCTACAAACAACTTCAGCAACAAGAACATACTGGGAAAGGGTGGTTTTGGAAATGTGTACAAAGGAAGACTTCAAGATGGGAGTGTTGTAGCTGTGAAGAGGCTAAAAGATGGGAATGCAATTGGAGGGGAGATTCAGTTTCAGACAGAAGTTGAAATGATCAGCTTGGCAGTGCACAGAAACCTCCTTAAACTTTATGGATTTTGTGTTACAGCAACAGAAAGGCTCTTGGTTTATCCCTACATGTGCAATGGGAGTGTTGCTACACGTCTGAAAGGAAAGCCAACATTGGAGTGGGGAACAAGGAAGCAAATAGCATTAGGAGCAGGAAGAGGACTGCTGTACCTTCATGAGCAGTGTGATCCAAAAATAATCCACAGGGATGTGAAAGCTGCAAACATATTACTTGATGAGTATTGTGAGGCAGTTGTTGGCGATTTTGGGTTGGCAAAGCTTTTGGATCACAAAGACACACATGTCACAACTGCTGTCAGGGGTACTGTGGGCCACATTGCACCTGAATATCTCTCCACAGGCCAGTCCTCTGACAAAACTGATGTCTTTGGATTTGGCATTCTCCTTCTTGAATTGATCACTGGCTTGAGGGCTTTGGAGTTTGGCAAGGCTGCTAACCAAAAAGGTGCTATGCTTGATTGGGTGATAAAAAGATTGTTATCAATAATAACACACCAAAACTACTATCTAAAGAACAACTATGACAGGATTGAGCTTGAGGAAATTGTAAAGGTAGCTCTATTGTGCACACAATATCTTCCGGCCCACAGGCCCAAGATGTCTGAGGTTGTGCGCATGCTTGAAGGTGATGGGCTTGCAGAGAAATGGGAAGCCTCACTAAGTGCCCATGACACAACAAAGCCCAACAAAGCCCATGAGTTCTCTTATTCAGATCGTTACTCTGATCTCACTGATGACTCTTCTTTGTTGGCCCAAGCTATGGAGCTTTCTGGCCCAAGATGA 2004 0.4271 MSFSSWASPDTRLFINGILILPSTLQFSFFLILKQLTLLLRSMGFSRTAESTLLLVAFFCLLRSAHALLSPKGINFEVQALMAIKASLVDPHGILDNWDGDAVDPCSWNMVTCSPQSFVISLGIPSQNLSGTLSPSIGNLTNLQSVVLQNNNITGPIPSELGKLSMLQTLDLSNNLFNGEIPQSLGHLRTLQYLRLNNNSFSGECPVSVANMAQLSFLDLSYNNLSGSVPRILAKSFSIVGNPLVCTTAKETNCHGMTLMPMSMDLNTTQSASLSGTQKTHKIAIAFGLSLGCLSFIALVFGLVIWWRHKRNKQAFFDVKDRHHEEVYLGNLKRFQLRELENATNNFSNKNILGKGGFGNVYKGRLQDGSVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLKLYGFCVTATERLLVYPYMCNGSVATRLKGKPTLEWGTRKQIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHKDTHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELITGLRALEFGKAANQKGAMLDWVIKRLLSIITHQNYYLKNNYDRIELEEIVKVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWEASLSAHDTTKPNKAHEFSYSDRYSDLTDDSSLLAQAMELSGPR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03293 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Arst10g03293 667 Pfam Protein kinase domain 348 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03293 667 Gene3D Transferase(Phosphotransferase) domain 1 424 633 - -
Arst10g03293 667 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
Arst10g03293 667 Gene3D Ribonuclease Inhibitor 74 256 IPR032675 -
Arst10g03293 667 ProSiteProfiles Protein kinase domain profile. 347 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03293 667 FunFam Somatic embryogenesis receptor-like kinase 1 424 634 - -
Arst10g03293 667 Gene3D Phosphorylase Kinase; domain 1 316 423 - -
Arst10g03293 667 SMART serkin_6 347 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03293 667 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Arst10g03293 667 FunFam Putative LRR receptor-like serine/threonine-protein kinase 74 256 - -
Arst10g03293 667 Pfam Leucine rich repeat N-terminal domain 77 114 IPR013210 -
Arst10g03293 667 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 54 625 - -
Arst10g03293 667 FunFam Somatic embryogenesis receptor kinase 1 316 423 - -
Arst10g03293 667 SUPERFAMILY Protein kinase-like (PK-like) 324 615 IPR011009 -
Arst10g03293 667 SUPERFAMILY L domain-like 77 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03293 Arst-Chr10 101561175 101565538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03293 50 667 Receptor kinase-like Gene Family AT5G16000 71.885 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Arst10g03293 Pkinase 2.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03293 - - gmx:100806650 1013.83