Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03292 ATGATGAGGGAAGGAACAAACATCAATATTGGCGGGAGTTGCAGCTCCCCCAACAACTGGTCACGTGCCTGCGACACGTGCCGCTCTGCACCCTGCGTGGTGTACTGCCGCGCGGACTCTGCCTATCTCTGCTCCGCATGTGACGACAGAGTCCACGCGGCAAACAGGGTGGCGTCGAGGCACGAGCGCGTGTGGGTCTGCGAGGCCTGCGAGCGTGCTCCGGCAGCCTTCCTCTGCAAAGCCGACGCCGCCTCTCTCTGCTCCTCCTGCGACTCCGACATCCACTCCGCCAACCCCCTTGCCGGCCGCCACCACCGCGTCCCCATTCTCCCCATCTCAGGCTGCTCCTCGCTCATCCGAGAAGGAGAACAAAAAGAAGGAGAACCAGAAAGAGAAAATGATCACGTGTTTGAAATTGAAGGTACAATTAATAATCAGAATTATAACCATGGATGTGAAATGGAGGATGAGGAGTGTGAGGGTGATGATGAGGCTGAAGCTGCTTCGTGGTTGTTGCCGCATCCTATGAGGATGGGTGGTAACGATGAGAGTGATGGGTTCTTGTTTTGTGGTGGCGACGGTGACGGCGATGGTGATGAGTACTTGGAGTTTGTGGATTGTGATGATGATAATAATAATAATAATAATAACCAGTTTAGTTGTCTTGATCATGATCAAGATCAAGATATGCTGCATAACTATGGCGGCGATCATAATCAGGGAAACAACCATGACAGCGTGGTTCCGGTTCAGATGCAACAGTGTTTCGAGTTTGACTCCTCTAAAGTTGGTGCTGGATTCAGTTACAATGGTTCTCTTAGTCAAAGTGTTTCAATGTCATCCATGGAAGTTGGAGTTGTACCAGAATCAACGTTGAGTGATGTGTCAATCTCACATTCAAAGCCACAAATAGGAACAAGTGAGCAATTTCCTCCAATGCCTATGCCTTCATCACTTCTAACTCCAATGGACAGAGTAGCCAGAGTTCTAAGATACAAAGAGAAAAAGAAAACAAGAAAGTTTGAGAAGAAAATAAGATATGAATCAAGAAAGGCCTATGCAGAAACCAGGCCACGTATTAAGGGTCGTTTTGCAAAGAGAACAGATGTAGAAGCTGAAGTTGATCAAATGTTATCATCAACCCTAATGTCAGAAGCTGGATATGGCATTGTTCCTTCCTTCTGA 1185 0.4793 MMREGTNINIGGSCSSPNNWSRACDTCRSAPCVVYCRADSAYLCSACDDRVHAANRVASRHERVWVCEACERAPAAFLCKADAASLCSSCDSDIHSANPLAGRHHRVPILPISGCSSLIREGEQKEGEPERENDHVFEIEGTINNQNYNHGCEMEDEECEGDDEAEAASWLLPHPMRMGGNDESDGFLFCGGDGDGDGDEYLEFVDCDDDNNNNNNNQFSCLDHDQDQDMLHNYGGDHNQGNNHDSVVPVQMQQCFEFDSSKVGAGFSYNGSLSQSVSMSSMEVGVVPESTLSDVSISHSKPQIGTSEQFPPMPMPSSLLTPMDRVARVLRYKEKKKTRKFEKKIRYESRKAYAETRPRIKGRFAKRTDVEAEVDQMLSSTLMSEAGYGIVPSF 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03292 394 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 24 384 IPR045281 GO:0009909
Arst10g03292 394 Pfam CCT motif 325 367 IPR010402 GO:0005515
Arst10g03292 394 MobiDBLite consensus disorder prediction 297 318 - -
Arst10g03292 394 CDD Bbox1_BBX-like 23 66 - -
Arst10g03292 394 ProSiteProfiles Zinc finger B-box type profile. 19 66 IPR000315 GO:0008270
Arst10g03292 394 ProSiteProfiles CCT domain profile. 325 367 IPR010402 GO:0005515
Arst10g03292 394 MobiDBLite consensus disorder prediction 297 314 - -
Arst10g03292 394 ProSiteProfiles Zinc finger B-box type profile. 62 109 IPR000315 GO:0008270
Arst10g03292 394 SMART bboxneu5 19 66 IPR000315 GO:0008270
Arst10g03292 394 SMART bboxneu5 67 109 IPR000315 GO:0008270
Arst10g03292 394 Pfam B-box zinc finger 64 109 IPR000315 GO:0008270
Arst10g03292 394 CDD Bbox1_BBX-like 66 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03292 Arst-Chr10 101548850 101551344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03292 19 394 C2C2-CO-like Transcription Factor Family AT3G02380 49.749 5.95e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Arst10g03292 zf-B_box 2e-07 No_clan