Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03287 ATGAGTTTACTCACAAACATGGAGCGCATTGAGTCATTATTCAACGCACCAAACACCAAGAAAAAATGGCACTCTGCTTTCTTAGTCATATATTGTTCTCGAGCCCTGGCGTCACACTTCACTCTCAACAACAAAACCAAACAAAGGAAGGTCAATCCTTCTCCATCATTCACCGTCATTGATTTGAATCCGCAACAACCCTTCACAATTGATCAAACCACCCTAACCACCATCGTCAAAGAAAAAGACCATGCTACCCTCAAGAAACACGGCGGCATTGAAGGCATAGCTAAATCCCTTGAAACTGACACCGAACATGGCATCAAAGGCGATGAACATGCAGAAGACATGTCACGCAGACGCCACATATTCGGCTCCAACACTTACCCAAAGCCACGTTCAAAAAGCTTCGTTCATTTCGTATTGGAAGCTTTCAAAGATGTCACCATTCTCATCCTTTTGTGCTGCGCAGCGCTTTCTCTCGGCTTCGGAATCAAGCAGCATGGACTCAAAGAAGGTTGGTACGACGGTGGAAGCATCTTCCTTGCTGTGTTCATTGTCATTTCTCTCTCTTCCATAAGCAATTTCAGACAGAATAGACAGTTTGACAAATTGTCTCAGCTCAGCAACGATATACAAATCGATGTGGTGAGACTCGGAAGGCGGCAACAGGTTTCGATCTATGATATCGTCGTCGGCGACGTTGTTTGCTTGAAGATCGGCGATCAAGTACCCGCCGACGGGCTATTCGTCGACGGACACTCGCTGCGAATCGACGAATCAAGCATGACTGGGGAGAGCGACCATGTGGAAGTTGGAAAGGTTCATAATCCGTTCTTGTTCTCCGGAACGAAAGTGGTTGACGGTTACGCGAAAATGATGGTTACTTCCGTTGGAATGAAGACTACATGGGGTCAAATGATGAGCTCGATTAGCCGCGACGTTAACGAGGAAACGCCGTTACAAGCTCGCCTTAACAAACTAACTTCATCAATTGGGAAGGTTGGTTTGGCAGTTGCTTTTCTTGTTCTTGTTCTTCTTCTTATCCGTTACTTCACGGGGAACACAAAAGATGAAAATGGAGTGAAAGAGTTCAACGGGAGCAAGACTAAGTTCAGTGATATAATGAACTCTGTCGTCGGAGTTGTGGCGGATGCAGTCACCATTGTGGTTGTTGCAATCCCTGAAGGGTTGCCGTTGGCGGTTACGTTGACTTTGGCTTATTCCATGAAGAAAATGATGGCGGATCAAGCTATGGTGAGGAAGCTCTCAGCGTGTGAGACTATGGGTTCTGCTACAACTATTTGCACAGATAAAACAGGAACACTCACACTCAACGAAATGAGAGTCACAAAGTTTTGGATGGGATTAGAACCTGTGTTGGAGAATGCGTATTCATCGGTTGCGCCTTTTGTTCTTCAATTGATCCAAGAAGGAGTGGCTTTGAACACAACTGGTAGCGTTCACAAGTCAAAATCCGAGTCCGGTTCCGGTTCCGATTTCGAGTTTTCCGGTAGTCCTACCGAGAAAGCGATCCTCTCTTGGGCGGTTTTGCAGTTGGATATGGAGATGGATGAATTGACGAAAGGATGCTCCATAATTCAGGTTGAGACCTTCAACTCGAAGAAGAAACGGAGCGGAGTTTTGTTGCGAAGGAAATCGGACAACACGGTGAATGTGCACTGGAAAGGCGCTGCTGAAATGGTACTGAAAATGTGTTCAAAGTACTACGATGCTTCTGGAATTTTGAAAGATCTTGACAGCGAAATCATGAGGAAATTCGAGAACATCATTCAAGGAATGGCAGCTAGTAGTCTTCGCTGTATCGCTTTTGCGCAAACGGAAGTTTCAGATTCAGAGATAGAGGTTGAAGACGGAGAGGAGAAAGCTATGGTGAAAGAAAATGGATTGACTCTACTAGGACTAGTCGGAATCAAGGATCCGTGCCGGCCGGGGGTGAAGGCGGCGGTGGAGTCTTGCCAGAACGCCGGAGTAAATGTGAAGATGATCACAGGGGACAATGTTTTCACTGCAAGAGCAATAGCAACAGAATGCGGCATACTGAGACAAAATCAAGACATGGATGGCGCGGTGGTGGAAGGCGAGGAGTTTCGCAACTACACGCCGGAGGAAAGGTTAGAGAAAGTGGACAAAATATGCGTGATGGCGAGATCCTCGCCGTTCGACAAGCTCCTGATGGTAGAGTGCCTAAAACAGAAAGGTCACGTGGTTGCCGTGACAGGGGACGGCACGAACGACGCGCCGGCACTGAAGGAAGCTGACATTGGACTCTCCATGGGGATCCAAGGCACAGAGGTGGCGAAAGAGAGCTCTGATATTGTGATTTTAGACGACAATTTCGCCTCCGTCGTAACGGTTTTGAGGTGGGGAAGGTGTGTTTATAACAACATTCAGAAGTTCATACAGTTCCAATTGACAGTGAATGTTGCTGCACTTGCAATAAACTTCGTGGCGGCGGTGTCGGCCGGCGAAGTTCCTCTCACGGCAGTGCAACTTTTATGGGTGAATTTGATCATGGACACGTTGGGAGCATTGGCACTTGCAACGGAAAAGCCTACTTTGGAGTTAATGGAGAAACCGCCGGTTGGGAGAACAAAACCTCTCATAACAAACGTGATGTGGAGGAATCTTATGGCACAAGCTTTGTACCAAATTGCGGTTTTGTTGACTCTTCAGTTCAGAGGTGAGTCTATCTTTGGTGTTACTAAAGGGGTTAATGACACTCTGATTTTTAACACTTTTGTTATGTGCCAAGTGTTTAATGAGTTCAATGCAAGGAAATTGGAGAAGAGGAATGTTTTTAAGGGGTTACATAGGAGCAAGTTGTTCTTGGGGATTATTGGTGTGACAGTGGTACTCCAAGTTGTGATGGTTGAGTTTTTGAAGAAGTTTGCTGATACTGAGAGGCTGAATTGGGGGCAATGGGGTCTTTGCATTCTTCTTGGTGCTGCTTCTTGGCCAATTGGTTGGGTTGTCAAGATGATTCCAGTTCCAGAAAAGCCATTTCTTGATTTCCTGAGTATCAAGAAATGA 3054 0.462 MSLLTNMERIESLFNAPNTKKKWHSAFLVIYCSRALASHFTLNNKTKQRKVNPSPSFTVIDLNPQQPFTIDQTTLTTIVKEKDHATLKKHGGIEGIAKSLETDTEHGIKGDEHAEDMSRRRHIFGSNTYPKPRSKSFVHFVLEAFKDVTILILLCCAALSLGFGIKQHGLKEGWYDGGSIFLAVFIVISLSSISNFRQNRQFDKLSQLSNDIQIDVVRLGRRQQVSIYDIVVGDVVCLKIGDQVPADGLFVDGHSLRIDESSMTGESDHVEVGKVHNPFLFSGTKVVDGYAKMMVTSVGMKTTWGQMMSSISRDVNEETPLQARLNKLTSSIGKVGLAVAFLVLVLLLIRYFTGNTKDENGVKEFNGSKTKFSDIMNSVVGVVADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNEMRVTKFWMGLEPVLENAYSSVAPFVLQLIQEGVALNTTGSVHKSKSESGSGSDFEFSGSPTEKAILSWAVLQLDMEMDELTKGCSIIQVETFNSKKKRSGVLLRRKSDNTVNVHWKGAAEMVLKMCSKYYDASGILKDLDSEIMRKFENIIQGMAASSLRCIAFAQTEVSDSEIEVEDGEEKAMVKENGLTLLGLVGIKDPCRPGVKAAVESCQNAGVNVKMITGDNVFTARAIATECGILRQNQDMDGAVVEGEEFRNYTPEERLEKVDKICVMARSSPFDKLLMVECLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTLELMEKPPVGRTKPLITNVMWRNLMAQALYQIAVLLTLQFRGESIFGVTKGVNDTLIFNTFVMCQVFNEFNARKLEKRNVFKGLHRSKLFLGIIGVTVVLQVVMVEFLKKFADTERLNWGQWGLCILLGAASWPIGWVVKMIPVPEKPFLDFLSIKK 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03287 1017 PANTHER CATION TRANSPORTING ATPASE 58 1004 - -
Arst10g03287 1017 PANTHER CATION TRANSPORTING ATPASE 58 1004 - -
Arst10g03287 1017 FunFam Calcium-transporting ATPase 642 792 - -
Arst10g03287 1017 Gene3D - 446 648 IPR023299 GO:0000166
Arst10g03287 1017 PRINTS H+-transporting ATPase (proton pump) signature 747 763 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst10g03287 1017 PRINTS H+-transporting ATPase (proton pump) signature 779 804 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst10g03287 1017 PRINTS H+-transporting ATPase (proton pump) signature 594 612 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst10g03287 1017 SMART Cation_ATPase_N_a_2 89 165 IPR004014 -
Arst10g03287 1017 SFLD C1.7: P-type atpase like 418 800 - -
Arst10g03287 1017 SFLD C1.7: P-type atpase like 418 800 - -
Arst10g03287 1017 Pfam Cation transporter/ATPase, N-terminus 90 160 IPR004014 -
Arst10g03287 1017 SUPERFAMILY Calcium ATPase, transmembrane domain M 91 1004 IPR023298 -
Arst10g03287 1017 FunFam Calcium-transporting ATPase 446 648 - -
Arst10g03287 1017 Pfam E1-E2 ATPase 213 414 - -
Arst10g03287 1017 Coils Coil 609 629 - -
Arst10g03287 1017 Gene3D - 433 792 IPR023214 -
Arst10g03287 1017 FunFam Calcium-transporting ATPase 764 1006 - -
Arst10g03287 1017 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 443 645 IPR023299 GO:0000166
Arst10g03287 1017 Pfam Cation transporting ATPase, C-terminus 832 1002 IPR006068 -
Arst10g03287 1017 Pfam haloacid dehalogenase-like hydrolase 433 761 - -
Arst10g03287 1017 NCBIfam calcium-translocating P-type ATPase, PMCA-type 81 1004 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Arst10g03287 1017 CDD P-type_ATPase_Ca_PMCA-like 118 880 - -
Arst10g03287 1017 SFLD p-type atpase 418 800 IPR044492 -
Arst10g03287 1017 SFLD p-type atpase 418 800 IPR044492 -
Arst10g03287 1017 FunFam Calcium-transporting ATPase 185 312 - -
Arst10g03287 1017 SUPERFAMILY HAD-like 434 852 IPR036412 -
Arst10g03287 1017 ProSitePatterns E1-E2 ATPases phosphorylation site. 438 444 IPR018303 -
Arst10g03287 1017 Gene3D - 143 1000 - -
Arst10g03287 1017 Gene3D - 115 312 - -
Arst10g03287 1017 PRINTS P-type cation-transporting ATPase superfamily signature 641 652 - -
Arst10g03287 1017 PRINTS P-type cation-transporting ATPase superfamily signature 771 783 - -
Arst10g03287 1017 PRINTS P-type cation-transporting ATPase superfamily signature 259 273 - -
Arst10g03287 1017 PRINTS P-type cation-transporting ATPase superfamily signature 747 766 - -
Arst10g03287 1017 PRINTS P-type cation-transporting ATPase superfamily signature 436 450 - -
Arst10g03287 1017 PRINTS P-type cation-transporting ATPase superfamily signature 663 673 - -
Arst10g03287 1017 SUPERFAMILY Calcium ATPase, transduction domain A 213 310 IPR008250 -
Arst10g03287 1017 NCBIfam HAD-IC family P-type ATPase 378 458 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Arst10g03287 1017 NCBIfam HAD-IC family P-type ATPase 720 828 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03287 Arst-Chr10 101492102 101495347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03287 10 1017 Primary Pumps ATPases AT3G22910 68.133 0.0 1315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03287 K01537 - gmx:100793918 1647.87