Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03270 ATGATGATACTAATTCATAAGTCACACACTATGATTGCATCATTTGTTTCAACACTACTACTTCTTATAGTGGGAGTAGTGAATTCATATCCAGAAGGTGATAAGATAAGCAGTTTGCCAGGCCAGCCACGTGTCACATTTCAGCAATATGCTGGCTACATTACTGTCGATGACAACCATGATAGAGCTTTGTTTTATTATTTTGTTGAAGCTGAATCAAACCCTGCTTCCAAGCCACTAGTTCTTTGGTTGAATGGAGGGCCTGGTTGTTCTTCGGTTGGAGTTGGAGCTTTTGTTGAGAATGGTCCTTTCAGACCCGGTGACAACAATATTCTTCTCAAAAATGATTATAGTTGGAATAAAGAGGCAAACATGCTATATTTGGAATCACCAGCTGGAGTTGGTTTCTCATACTCTAGCAATAAATCTTTCTATGACTTGGTTACCGATGAGATAACAGCAAGGGATAATCTTATATTCTTAGAGCGCTGGTTTGCTAAATTTCCTGAGTATGCAAAAAACGACTTCTTCATTACTGGGGAGAGCTATGCAGGTCACTATGTTCCACAACTTGCATTTCTTGTTATTCAATCCAACACCACCTTCAATGTTAATCTTAAGGGAATAGCGTTAGGGAATCCTCTGCTGGATTTTAATGTTGACATGAATTCGGAAGCGGATTATTTATGGTCTCATGGGCTAATATCTGATTCGACATACGAACTGTACAATACAATATGCAACTCTTCTCAATATATGAGAGAATCTATAGATGGAAAGATTAGTGCTGATTGTGCAAGAGTAAATAATGTATCGTCCAGCGAGATATCCGATTATGTTGATCAATATGATGTCACTCTTGATGTTTGTTTGTCACCAGCCAAACAACAAGTTTATATGCTCACAAATCAAATGCATGCTACACAAAATGTAGATGTTTGTGTGGGAGATAAATTAGTGGTATACTTAAATAGGAAAGATGTGCAACAAGCACTCCATGCTAGACTTGTTGGAGTTACCAAATGGTCAACTTGCAGCACGGTTCTGAATTATGACTATCATAATCTAGAAATACCAACACTTCCTCTTCTAGGTACATTTGTTGAGTTGGGTATTCGGGTTCTCGTATACAGTGGAGACCAAGATTCAGTGATCCCATTAATTGGATCAAGATTTCTGGTGAATGCATTAGCCAAAGAAATTGGACTCAATACAACAGTGCCCTATGGAGTCTGGTTTCAGGGAAAACAGGTAGCGGGATGGACACAAGAATATGGCAAGATATTATCATATGCGACGATTAGAGGAGCATCTCATGAAGCTCCATTCTCTCAACCAGCCAGATCGTTAGTGCTACTTCAAGCATTTCTTCAAGGAAAACCACTTTCCAATAATATATGA 1401 0.3869 MMILIHKSHTMIASFVSTLLLLIVGVVNSYPEGDKISSLPGQPRVTFQQYAGYITVDDNHDRALFYYFVEAESNPASKPLVLWLNGGPGCSSVGVGAFVENGPFRPGDNNILLKNDYSWNKEANMLYLESPAGVGFSYSSNKSFYDLVTDEITARDNLIFLERWFAKFPEYAKNDFFITGESYAGHYVPQLAFLVIQSNTTFNVNLKGIALGNPLLDFNVDMNSEADYLWSHGLISDSTYELYNTICNSSQYMRESIDGKISADCARVNNVSSSEISDYVDQYDVTLDVCLSPAKQQVYMLTNQMHATQNVDVCVGDKLVVYLNRKDVQQALHARLVGVTKWSTCSTVLNYDYHNLEIPTLPLLGTFVELGIRVLVYSGDQDSVIPLIGSRFLVNALAKEIGLNTTVPYGVWFQGKQVAGWTQEYGKILSYATIRGASHEAPFSQPARSLVLLQAFLQGKPLSNNI 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03270 466 FunFam Carboxypeptidase 29 463 - -
Arst10g03270 466 Pfam Serine carboxypeptidase 41 459 IPR001563 GO:0004185|GO:0006508
Arst10g03270 466 FunFam Carboxypeptidase 360 459 - -
Arst10g03270 466 SUPERFAMILY alpha/beta-Hydrolases 37 462 IPR029058 -
Arst10g03270 466 ProSitePatterns Serine carboxypeptidases, histidine active site. 429 446 IPR033124 GO:0004185
Arst10g03270 466 Gene3D alpha/beta hydrolase 32 465 IPR029058 -
Arst10g03270 466 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 446 IPR001563 GO:0004185|GO:0006508
Arst10g03270 466 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Arst10g03270 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Arst10g03270 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 429 442 IPR001563 GO:0004185|GO:0006508
Arst10g03270 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Arst10g03270 466 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03270 Arst-Chr10 101278020 101281685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03270 322 462 Calmodulin-binding Proteins AT2G22960 31.206 2.78e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03270 K16297 - gmx:100799900 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03270 10 101278020 101281685 Arst10g03270 10 101278020 101281685 ECH