Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03265 ATGGACCATAACAACTCTGACCTGTTCCAACTGCTTGGTGCCGGTGGTGGTGGTGGGTATTACCCGGCTGCTGCCATGTTGATGATGGATCATCATCAGCATCAGGTGTCCTCTGATGATAACATGAGCGCCATAGAGACAGAAGCCTCTCATCATCATCAACAACAAGATAGAGCACTCGCTGCCCTCAGAAACCACAAGGAAGCTGAGAAGAGACGCAGGGAGAGAATCAATTCTCACCTTGCTCGTCTTCGCACTCTTCTCCCTTGCAACTCCAAGACAGATAAAGCATCGCTTCTTGCAAAGGTGGTGCAGAGAGTGAAAGAGTTAAAACAGCAAACATCAGAAATAATCACCGAATTCGAAACCCTACCCTCCGAAACAGACGAGATCAGCGTCCTGTCCACCGCAGACGGCGGCCACGGAGGGCTGATATTCAAGGCCTCCCTGTGCTGCGAGGACCGCTCCGATCTCATCCCGGAGCTCATAGAGATTCTCAAATCTCTGCACCTGAAGACGCTGAGGGCAGAAATGGCAACCCTAGGCGGAAGAACCCGCAACGTTCTGGTGGTTGCCGCCGACAAAGAACACAACAGCATAGAGTCCATTCATTTTCTTCAGAACTCGTTGAGGTCCTTGCTTGAACGCTCTGGTTCCGCCGATCGCTCCAAACGACGCCGTGCCATGGATCGAAGATTCACGCCTGCTTCATCATGA 717 0.5188 MDHNNSDLFQLLGAGGGGGYYPAAAMLMMDHHQHQVSSDDNMSAIETEASHHHQQQDRALAALRNHKEAEKRRRERINSHLARLRTLLPCNSKTDKASLLAKVVQRVKELKQQTSEIITEFETLPSETDEISVLSTADGGHGGLIFKASLCCEDRSDLIPELIEILKSLHLKTLRAEMATLGGRTRNVLVVAADKEHNSIESIHFLQNSLRSLLERSGSADRSKRRRAMDRRFTPASS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03265 238 Pfam Helix-loop-helix DNA-binding domain 65 110 IPR011598 GO:0046983
Arst10g03265 238 MobiDBLite consensus disorder prediction 217 232 - -
Arst10g03265 238 FunFam transcription factor bHLH30 56 119 - -
Arst10g03265 238 Gene3D - 54 119 IPR036638 GO:0046983
Arst10g03265 238 MobiDBLite consensus disorder prediction 217 238 - -
Arst10g03265 238 CDD bHLH_AtAIG1_like 56 133 - -
Arst10g03265 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 132 IPR036638 GO:0046983
Arst10g03265 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 61 110 IPR011598 GO:0046983
Arst10g03265 238 PANTHER TRANSCRIPTION FACTOR BHLH30 39 229 IPR045847 GO:0003700|GO:0006355
Arst10g03265 238 SMART finulus 67 116 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03265 Arst-Chr10 101197991 101199416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03265 16 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 64.878 7.11e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst10g03265 HLH 2.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03265 - - gmx:100802566 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03265 10 101197991 101199416 Arst10g03265 10 101197991 101199416 ECH