Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03258 ATGCCTTACCTTGTCCGCGAGAATCTCTTCATCGGAAACATCAGCGACGCCGCGGAGATCCTCCAGAACGGTGGAGGTGGCGGTGCTGCCGGAGGAGGAGACTTCACACACATACTCTCCGTCCTCAGCTCCGCCTCCATTTCCTTCTTCTCCGAATGGCGCCCATCCGTCTCCATCCCCGTAAAGGAGATCAACAAGGTCTACGTTTCCGGCGCCGGCAGCGGTGACTCCGGCAAGTGTGCCTTGTCGCCGGAGAAGCTCCTCTACTCTCTCGAGTACGCCGGACGTGACCTCAAGCTTGTGAGGATGGCGGTGCCTCTGAAGGACACGGAGAACGAGGACTTGCTTGATTACCTCGAAGTTTGCATCGACTTCATTGATCGTAGCAGGAAGGAAGGTTCCGTTTTGGTTCACTGCTTCGCCGGAGTTTCTAGAAGTGCGGCAGTGATTACGGCGTACTTGATGAGAATGGAAAATCTCTCTCTCGAAGATGCCCTTGAATCATTAAGGAAGAGCTATGAATTTGTTTGCCCCAATGATGGCTTTCTTGAGCAGTTGAGAATGTTCGAGGAGATGGGCTTCAAGGTTGATCACTCCAGTCCTATATATAAGCGCTTTCGTCTGAAAATACTTGGTGAGAGTCATTTCTCAGGGTCAAGAATAGACAGTTCTAAACTGGGTGCAGACCCTGGCATGCCTGTCCAAATTTCTTCAGATGTTGAAGGAGCTACTAAAGTAGAAACTAATAGGAGTCCTACATATCGCTGTAAGAAGTGCCGACGAATTGTTGCATTGCAAGAACATGTTGTAGATCACATTCCTGGTGAGGGTGAGACGTCCTTTGAGTGGCATAAGCGAAGAAGTGGCAATCCTTTCAACAAGTCTAATGAATCGTGTTCGTCCATATTTATTGAGCCTCTCCGGTGGATGAAAGCTGTTGAGGAAGGCGCATTGGAGGGAAAACTGTCATGCGTTCATTGCGATGCCCGTTTGGGATACTTCAACTGGGCAGGCATACAGTGCAGCTGCGGAAGCTGGATAACCCCAGCTTTTCAACTCCACAAAGGCCGTGTAGATATAAGCCCTGTATGA 1092 0.5 MPYLVRENLFIGNISDAAEILQNGGGGGAAGGGDFTHILSVLSSASISFFSEWRPSVSIPVKEINKVYVSGAGSGDSGKCALSPEKLLYSLEYAGRDLKLVRMAVPLKDTENEDLLDYLEVCIDFIDRSRKEGSVLVHCFAGVSRSAAVITAYLMRMENLSLEDALESLRKSYEFVCPNDGFLEQLRMFEEMGFKVDHSSPIYKRFRLKILGESHFSGSRIDSSKLGADPGMPVQISSDVEGATKVETNRSPTYRCKKCRRIVALQEHVVDHIPGEGETSFEWHKRRSGNPFNKSNESCSSIFIEPLRWMKAVEEGALEGKLSCVHCDARLGYFNWAGIQCSCGSWITPAFQLHKGRVDISPV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03258 363 Pfam Dual specificity phosphatase, catalytic domain 102 191 IPR000340 GO:0008138|GO:0016311
Arst10g03258 363 SMART dsp_5 1 192 IPR020422 GO:0006470|GO:0008138
Arst10g03258 363 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 116 171 IPR000387 GO:0016311|GO:0016791
Arst10g03258 363 ProSiteProfiles Dual specificity protein phosphatase domain profile. 1 195 IPR020422 GO:0006470|GO:0008138
Arst10g03258 363 ProSitePatterns Tyrosine specific protein phosphatases active site. 137 147 IPR016130 GO:0016311|GO:0016791
Arst10g03258 363 CDD DSP_DUSP12 4 197 - -
Arst10g03258 363 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 98 193 IPR029021 -
Arst10g03258 363 Gene3D Protein tyrosine phosphatase superfamily 4 212 IPR029021 -
Arst10g03258 363 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 359 - -
Arst10g03258 363 FunFam Dual specificity protein phosphatase 12-like 4 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03258 Arst-Chr10 101152264 101155086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03258 100 191 Protein tyrosine phosphatase (PTP) family AT3G06110 37.634 1.03e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03258 K14819 - gmx:100804683 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03258 10 101152264 101155086 Arst10g03258 10 101152264 101155086 ECH