Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03245 ATGCCTTCTTCGAATTCGAATAAGAAGAAGCATTCCAAGTCAAAGCACGAAGCTGCTTCTTCTGCACCACCGGTTACTCCTCCTCGAACGCCGTCACGCCCCGACGACGAGGCCGACCTCGCCGCTTCTATCTGCCTTCCAGAAGCTTCTCGAAGGTACCCTTCCTTCATCGGAGCATCTGCCGTTGTCGCCCAAGTCTCCGCCGTTGATAATGCGCCTAATTCCACGGACTCAAGAATCTGGCTCTCCGAACTTGCCATGGTTTCCTCTTCTCTTGCCCCTGGTACTCTTGTCTCGGTGTCAATTGCTTCATCAATGAACAGAAGTGTGCAATTGAATCCTCTCAAGTCATTAGTTGATGAATGTGTTAGATGCTACGGCTTGGAAACTGGGAAGACGTTGAAAGATGATGTCACAGGGAATTACTTTGTGCTTGCAACTGTTTTCCCTTCTACGAAGGTTTTGAAGAATGGAGTACGTCTGTCCTCAAATATTTCTTGTACAATGGGATGTCCTCCTTTGGGTACAATAGTGTTTGTTTACCCAGTACAGAAACAGTACTTATCTGGTCTTGCAAATGGGAGCACTGAACTGCATTATACAGAAAGTAATTGTCTCTCGATATATAATTGCAAGGAATTGTATCTACAGCTTGCTCCTCATAAGGATGGATTTCAATTGGACATTAATAACTCAGCCTCTGTGACGAAATCCCAAGTCCAATCAGACAGTGATATTTTTGCATCTCCTAGCACACCTTCTAATGGATCAAAGTTTTCTAATGCTAGTGTGTTGTCTTCTCCAAGATTTGAAGATTCAGCATCAACTATACCCATTCAGAATAATCAATCTATGGCTTCATTCAATATTATGGATGCATTAGGAGATGAAAGTTCGAAAAAATTACTACAGGCATGTGCAACTTCATGGTTATATTCTCGTTATTTACTGCTAGGTAATTTTGTCTCTGTACCAATGTTTTCAGAGGTGTGCATTTTCCAAGTGATAGGAGCCAAAAAGGCACCAGTTGATAGAGCTGATAATTATTCATCAAATGGGATCAATAATTTGTGTCTTGAGGATTCTGATGTAGCAGAAAATGTGAATGAGGCAATAGTTGTCAATTGTGAAACAAAGGTATTTTTATCTTTGCAATCAAATGCAGCATCTAAAGAGTCAATTCAAAGGGATTTGCCCAGTGAAAAACGTAAAGCAGAGGTTGCTAATCCTAGCATATATGATAATATTTCTAAACTGGGTGGTCTATCTAAAGAATATACAGTTTTAAAGGATATAATTTCTTCATCAGTAAAGGATGCTTTATCAAGTTTTGGTTTACGTATCACAAGAGGAGTCCTTCTACATGGTCCACCTGGTACAGGGAAGACTTCCCTTGCTCAATTATGTGCTCATGATGTTGGGGTAAATTTTTTCCAAATAAATGGACCTGAAATTGTTACCCAGTATTTTGGGGAAAGTGAGCAAGCATTGCATGAAGTTTTTGATTCAGCAATTCAAGCTGCACCTGCTGTGGTATTCATTGATGAATTAGATGCAATTGCCCCTGCAAGAAAAGATGGAGGTGAAGAGCTATCTCAAAGAATGGTTGCAACATTATTGAATTTGATGGATGGAATTAGTAGAACCGAAGGGTTGCTTGTAATTGCTGCCACCAACAGGCCTGATCATATTGAGCCAGCTCTCCGACGACCTGGAAGATTTGACAAAGAAATCGAAATTGGTGTGCCGTCCCCAAAACAACGCTTGGATATTTTGTTCACTCTTCTTTGTGGAGTGGATCATTCTCTCTCAGATTTACAAGTTGAACACCTTGCCACTGTCACTCATGGTTTTGTGGGCGCTGATCTGGCCGCCCTTTGCAATGAGGCGGCGCTGATTTGTCTAAGACGTTATGCTAATTTAAAGAAGAGTTGTGGTGATTTTTCCAATGATATAACAGAGCAACCCACATTGATGAATGGCGAAACAAACTCCAGAAATCAATCAGGTAGTGCAACTTCATCTGTTTCAGAATCTGATACATCAGTGGCCTCCAATGCTGTATTACAGCTCTGCATGATGGACACAACTTCGGAATCTATGGAAATAATTTCTGATAGTGATAAAGACCACAATTTGAAAGTCAGTTTTGAAGATTTTCAGAAGGCTAGAATGAAAATAAGACCCAGTGCCATGCGAGAGGTAATCCTTGAGGTTCCAAAGGTCAATTGGGAAGATGTAGGTGGTCAAAATGAAGTCAAAGCTCAGTTAATGGAAGCTGTAGAGTGGCCCCAGAAGCACCGTGATGCGTTCAACCGTATTGGGACTCGCCCTCCTACAGGTGTATTGATGTTTGGGCCTCCAGGTTGTAGCAAAACCCTCATGGCACGAGCAGTTGCATCTGAAGCTGGGCTGAACTTCCTAGCTGTCAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGTGAATCAGAGAAGGCTGTCAGATCATTGTTTGCAAAAGCAAGGACCAATGCCCCATCCATTGTATTTTTTGATGAAATTGATAGTCTTGCTGTAACCCGTGGGAAGGAAAGTGATGGTGTTTCAGTGTCAGATAGGGTCATGAGTCAACTTCTTGTTGAATTGGATGGTCTGCATCAAAGAGTTAATGTCACTGTCATAGCTGCTACAAATAGGCCAGATAAGATTGATCCTGCCCTTTTAAGACCAGGACGCTTTGATCGCCTGCTTTATGTTGGACCTCCAAATGAGACAGACAGAGAAGATATATTTCGCATTCATTTGCGTAAAATTCCATGTGATTCTGATGTAAGCATTAAAGAACTTGCTCACCTCACAGATGGTTGTACTGGGGCTGACATATCACTAATATGTCGAGAGGCAGCCGTTGCAGCGATTGAGGAGAACCTTGGTGCTTCAGTTATATCAATGAAGCATTTAAAGAAGGCAATCAATCAGGTCCAGCCATCTGAAGTACAGTCCTACCAGAAGCTGTCAGCAAAGTTTCAAAGGGCTGTTCGCAGCTGTGATACAAATGAACTTGATCATATGCCGCACAAAAGTGGATATACTTCGTTCAACGTTCG 3086 0.4203 MPSSNSNKKKHSKSKHEAASSAPPVTPPRTPSRPDDEADLAASICLPEASRRYPSFIGASAVVAQVSAVDNAPNSTDSRIWLSELAMVSSSLAPGTLVSVSIASSMNRSVQLNPLKSLVDECVRCYGLETGKTLKDDVTGNYFVLATVFPSTKVLKNGVRLSSNISCTMGCPPLGTIVFVYPVQKQYLSGLANGSTELHYTESNCLSIYNCKELYLQLAPHKDGFQLDINNSASVTKSQVQSDSDIFASPSTPSNGSKFSNASVLSSPRFEDSASTIPIQNNQSMASFNIMDALGDESSKKLLQACATSWLYSRYLLLGNFVSVPMFSEVCIFQVIGAKKAPVDRADNYSSNGINNLCLEDSDVAENVNEAIVVNCETKVFLSLQSNAASKESIQRDLPSEKRKAEVANPSIYDNISKLGGLSKEYTVLKDIISSSVKDALSSFGLRITRGVLLHGPPGTGKTSLAQLCAHDVGVNFFQINGPEIVTQYFGESEQALHEVFDSAIQAAPAVVFIDELDAIAPARKDGGEELSQRMVATLLNLMDGISRTEGLLVIAATNRPDHIEPALRRPGRFDKEIEIGVPSPKQRLDILFTLLCGVDHSLSDLQVEHLATVTHGFVGADLAALCNEAALICLRRYANLKKSCGDFSNDITEQPTLMNGETNSRNQSGSATSSVSESDTSVASNAVLQLCMMDTTSESMEIISDSDKDHNLKVSFEDFQKARMKIRPSAMREVILEVPKVNWEDVGGQNEVKAQLMEAVEWPQKHRDAFNRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARTNAPSIVFFDEIDSLAVTRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNETDREDIFRIHLRKIPCDSDVSIKELAHLTDGCTGADISLICREAAVAAIEENLGASVISMKHLKKAINQVQPSEVQSYQKLSAKFQRAVRSCDTNELDHMPHKSGYTSFNVRNVLKSCALLLPIPAVILYLWTARSG 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03245 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 740 992 IPR027417 -
Arst10g03245 1054 FunFam Putative vesicular transport protein (CDC48) 403 581 - -
Arst10g03245 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 417 639 IPR027417 -
Arst10g03245 1054 Gene3D - 397 581 IPR027417 -
Arst10g03245 1054 Pfam ATPase family associated with various cellular activities (AAA) 782 913 IPR003959 GO:0005524|GO:0016887
Arst10g03245 1054 Pfam ATPase family associated with various cellular activities (AAA) 452 581 IPR003959 GO:0005524|GO:0016887
Arst10g03245 1054 PANTHER AAA-FAMILY ATPASE 267 1004 - -
Arst10g03245 1054 Gene3D - 743 1014 IPR027417 -
Arst10g03245 1054 FunFam calmodulin-interacting protein 111 isoform X1 739 914 - -
Arst10g03245 1054 CDD RecA-like_CDC48_NLV2_r1-like 418 580 - -
Arst10g03245 1054 ProSitePatterns AAA-protein family signature. 884 902 IPR003960 GO:0005524|GO:0016887
Arst10g03245 1054 ProSiteProfiles EF-hand calcium-binding domain profile. 695 730 IPR002048 GO:0005509
Arst10g03245 1054 Gene3D - 915 1003 - -
Arst10g03245 1054 FunFam Calmodulin-interacting protein 111 583 742 - -
Arst10g03245 1054 MobiDBLite consensus disorder prediction 653 681 - -
Arst10g03245 1054 MobiDBLite consensus disorder prediction 1 38 - -
Arst10g03245 1054 FunFam spermatogenesis-associated protein 5-like protein 1 915 997 - -
Arst10g03245 1054 Gene3D - 583 742 - -
Arst10g03245 1054 CDD RecA-like_CDC48_r2-like 753 912 - -
Arst10g03245 1054 Pfam AAA+ lid domain 936 982 IPR041569 -
Arst10g03245 1054 Pfam AAA+ lid domain 605 639 IPR041569 -
Arst10g03245 1054 SMART AAA_5 778 916 IPR003593 GO:0016887
Arst10g03245 1054 SMART AAA_5 448 584 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03245 Arst-Chr10 100989771 100996434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03245 1 1039 Calmodulin-binding Proteins AT3G56690 56.314 0.0 1050