Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03244 ATGAGGGAAGAAGATTCAAACTGGTTTGCCAGATGGGAAGACGAACTACCTCCGCCGGAGGAACTCATGCCCTTATCGCAAACCCTAATCACACCCGATCTTGCCATCGCCTTCGACATCCCCAGTCCTCACACCCCAACCGCCGCCGCCCGCCACCCCAACCACCCCGAACCACCACCTCCACCACCACCAACAACCACAGCAACCGCAACCACCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCCTTCCCCCTCGCATCAGCAACAACCCTCCTCCGGCGGCGACTTCGCCGACTCCGGCGATCTTGGCTCCGGCGCCGCCGGTGAGGAGCCAGCCAGAACCCTCAAGAGGCCCCGCCTCGTTTGGACCCCACAGCTCCACAAGCGCTTCGTCGACGCCGTCGCACACCTCGGAATCAAGAACGCGGTTCCGAAGACCATAATGCAGCTCATGAGCGTTGACGGCTTGACCCGAGAGAACGTCGCCAGCCACCTCCAGAAGTACCGCCTC 522 0.5805 MREEDSNWFARWEDELPPPEELMPLSQTLITPDLAIAFDIPSPHTPTAAARHPNHPEPPPPPPPTTTATATTFXXXXXXXXXXXXPSPSHQQQPSSGGDFADSGDLGSGAAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03244 174 Pfam Myb-like DNA-binding domain 125 173 IPR001005 -
Arst10g03244 174 Gene3D - 118 174 - -
Arst10g03244 174 NCBIfam myb-like DNA-binding domain, SHAQKYF class 122 174 IPR006447 GO:0003677
Arst10g03244 174 MobiDBLite consensus disorder prediction 52 67 - -
Arst10g03244 174 MobiDBLite consensus disorder prediction 1 18 - -
Arst10g03244 174 SUPERFAMILY Homeodomain-like 118 174 IPR009057 -
Arst10g03244 174 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 174 IPR044841 GO:0003700|GO:0006355
Arst10g03244 174 FunFam Two-component response regulator 117 174 - -
Arst10g03244 174 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 126 174 IPR017930 -
Arst10g03244 174 MobiDBLite consensus disorder prediction 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03244 Arst-Chr10 100982336 100983297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03244 1 174 G2-like Transcription Factor Family AT3G10760 64.205 1.74e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst10g03244 Myb_DNA-binding 8.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03244 - - adu:107471418 260.766