Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03227 ATGGCGACGTACTTTCATGGCAATTCAGAAATCCAAGCACCTTCTTCTGCTGATGGACTTCAAACGCTTGTTCTCATGAACCCTCCACCTCCTCCTCCTCCTCCTGCTGCTGCCTACATCCACTACCCTGACGCGCCACCACCATCTCACGCACCCGCCAACCTTCTCTTTCTCAACTCTTCCGCCGCCGGAAACAACTCCTTCTCCCCTCACGCGCCTCCCCCTCATACTCAACAGTTTGTTGGAATCCCACTCTCCTCGCAGGACATCAACCACCACCACGACGTCTCCGCCCTGCATGGCTTCCTCCACCGCATGCAGTACAACCCCTGGACAACCATGGACCCCACCTCGGCGGCGCGTGAGACCCCACGCGCTCAGCAAGGTCTGTCCCTGAGTCTGTCCTCGCAGCAAGCCGGGTTAGGTTCTTTCAGGGACGTGGCGCCGCAGGCTTTGTCCGGCGACGAGATTTGCGGTGGTCGGTCAACGTCATCGGCTTCTGCAGTGACGAACGGTGGGTCGAGCATTCAGAGCGTGATTTTGAGCTCAAAGTATCTGAAGGCAGCGCATGAGCTTCTGGAAGAGGTTGTGAATGTTAACAACGCTGAGTTGGCGACGAAGAAGATGATGAAGACAGTTGGCGAGTCATCCACTGCAGCAAGCGGAGACGGTTCCATTGGTGGCGAGGGTAGCGGCAAGCGTAGCTCAGAGCTTTCCTCGGCGGAGAGACAAGAAATTTCACTGAAGAAAGCAAAGCTACTGAGCATGCTTGATGAGGTAGAGCAAAGGTACAGACAGTACCAGCAGCAGATGGAGGTGGTGGTGTCATCGTTCGAGCAAGCGGCGGGAATAGGGTCGGGTCGGACATACACGGCGCTTGCACTGCAAACAATTTCGAAGCAGTTTAGGTGCTTGAAGGACGCCATAACAAGACAGATCAAAGGTGCAAACAAGAGCTTAGGAGAGGAAGAAGGGTCACGCCTTAAATATGTTGATCATCACTTGCGTCAACAGAGAGCTCTCCAACAATTGGGAATGATCCAGCACAATGCTTGGAGACCCCAGAGAGGCTTGCCTGAACGTTCTGTTTCTCTTCTTCGTGCTTGGCTCTTTGAACACTTCCTCCATCCCTATCCCAAGGATTCTGACAAGCACATGCTTGCTAAACAAACTGGCCTTACCAGGAGCCAGGTAACTAACACTTATTCACTTTCAAATTGGTTTATAAATGCTCGAGTTCGACTTTGGAAGCCAATGGTCGAAGAAATGTATGCAGAGGAGATGAAGGATCACCACTTCAACAACAATGCTACTACTTCTGACGACAAATCAAACAACACCAACAACCAAGACCCTTCAACAAAAATTGCAGACAAACTTCCAACATCTGAAACAGAATCTCATAAACAAGACCACAACACTCCCGTGGTGTCACCACTTGAAGGGAACATGAGAAACCAACCAGGGTTCAGCTTCATCATGGGATCATCAGAACTAGAAGGAATCACACAACACCAGCAGGGAAATAGTCCCAAGAAACCAAGAATCAGCAACAATGAAGCTATGCATAGTTCCCAAAGTAACATTCCTTCCATGAACATGATGGATGTGAAGCCCAATGAGCAGGGGAGACAAGGTTATTCTTTCATGGGGAACCAAACTAACTTCATTAGCGGTTTTGGACAGTACCCTTCCATTGGTGACATGGATAGGTTTGATCCAGAACAATTCACAACACCACCACCAAGGTTTTCAGGTAATGGAGTTTCCCTCACTCTTGGTCTTGATTCATTGCCCGGAACGCACCACCAATCGTTTCTACCAAACCAGAACATTCAACTCGGAAGAAGCATTGATATCGCGGAACCAAACGATTTCGTTGGCGCCATGAACACTTCTTCATCTCCTCATTCCTCTGCTGCTGCTGCATTTGAGAGTATTGGCATGCAGAATCCAAAGAGGTTTGCTGCACAATTGTTGCCAGACTTTGTGGCCTGA 1998 0.499 MATYFHGNSEIQAPSSADGLQTLVLMNPPPPPPPPAAAYIHYPDAPPPSHAPANLLFLNSSAAGNNSFSPHAPPPHTQQFVGIPLSSQDINHHHDVSALHGFLHRMQYNPWTTMDPTSAARETPRAQQGLSLSLSSQQAGLGSFRDVAPQALSGDEICGGRSTSSASAVTNGGSSIQSVILSSKYLKAAHELLEEVVNVNNAELATKKMMKTVGESSTAASGDGSIGGEGSGKRSSELSSAERQEISLKKAKLLSMLDEVEQRYRQYQQQMEVVVSSFEQAAGIGSGRTYTALALQTISKQFRCLKDAITRQIKGANKSLGEEEGSRLKYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSLLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVTNTYSLSNWFINARVRLWKPMVEEMYAEEMKDHHFNNNATTSDDKSNNTNNQDPSTKIADKLPTSETESHKQDHNTPVVSPLEGNMRNQPGFSFIMGSSELEGITQHQQGNSPKKPRISNNEAMHSSQSNIPSMNMMDVKPNEQGRQGYSFMGNQTNFISGFGQYPSIGDMDRFDPEQFTTPPPRFSGNGVSLTLGLDSLPGTHHQSFLPNQNIQLGRSIDIAEPNDFVGAMNTSSSPHSSAAAAFESIGMQNPKRFAAQLLPDFVA 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03227 665 SMART prehox3 174 311 IPR006563 -
Arst10g03227 665 SUPERFAMILY Homeodomain-like 353 426 IPR009057 -
Arst10g03227 665 Pfam Homeobox KN domain 369 414 IPR008422 GO:0003677|GO:0006355
Arst10g03227 665 MobiDBLite consensus disorder prediction 214 241 - -
Arst10g03227 665 SMART HOX_1 352 422 IPR001356 GO:0003677
Arst10g03227 665 CDD homeodomain 352 419 IPR001356 GO:0003677
Arst10g03227 665 Pfam Associated with HOX 179 310 IPR006563 -
Arst10g03227 665 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 79 448 - -
Arst10g03227 665 Coils Coil 243 277 - -
Arst10g03227 665 MobiDBLite consensus disorder prediction 503 532 - -
Arst10g03227 665 MobiDBLite consensus disorder prediction 438 460 - -
Arst10g03227 665 MobiDBLite consensus disorder prediction 433 483 - -
Arst10g03227 665 ProSiteProfiles 'Homeobox' domain profile. 349 418 IPR001356 GO:0003677
Arst10g03227 665 Gene3D - 355 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03227 Arst-Chr10 100814168 100817665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03227 1 665 Homeobox Transcription Factor Family AT2G35940 45.586 1.32e-158 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03227 - - aip:107622581 1204.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03227 10 100814168 100817665 Arst10g03227 10 100814168 100817665 ECH