Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03223 ATGAACATTCATAATCATCATTACTCGGACGATGAAGTGATTCTGGCTTCGTCGATGCCGAAGAAGAGAGCGGGGAGGAGGGTGTTCAAGGAGACGAGGCACCCAGTGTACAGGGGAGTGCGGAGGAGGAACAACAACAAGTGGGTTTGCGAGATTCGTGTTCCGAACAACGTTAACAACACAAGGATATGGCTTGGAACTTATCCTACACCTGAAATGGCAGCACGTGCACACGATGTTGCTGCTCTTGCGCTTCGCGGCAAGTCCGCTTGCCTCAACTTCGCTGACTCTGCTTCGCGCTTGCAGCTTCCGTCTTCCACCGATCCGGAGGACATCAGGAGGGCTGCCGTTGAGGCTGCGGCGGCGTTCGCGGCGGAGGACAGCGCCCAGCAGGAGCATCAGGAGCAGAGTGTTGGGGAATGCGTGGTGGGGATTGAAGAGGATGTGAACAAGGCTTCTGAATTTGAGGTTAACGTTGTTCCGGCGGTTTCTGAATTTGAGGATTGGCATGATTTGGTTATGAGCATGGCGGATGAACCTCTAAGATCTCCTCCTCATCCTGCTTTTCCGAGAGATGGCAGTAATGACGTAGAGATATTCGATGTTGGTTTGCCACTCTGGAGCTTCTCCATTTGA 636 0.5283 MNIHNHHYSDDEVILASSMPKKRAGRRVFKETRHPVYRGVRRRNNNKWVCEIRVPNNVNNTRIWLGTYPTPEMAARAHDVAALALRGKSACLNFADSASRLQLPSSTDPEDIRRAAVEAAAAFAAEDSAQQEHQEQSVGECVVGIEEDVNKASEFEVNVVPAVSEFEDWHDLVMSMADEPLRSPPHPAFPRDGSNDVEIFDVGLPLWSFSI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03223 211 CDD AP2 37 97 IPR001471 GO:0003700|GO:0006355
Arst10g03223 211 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 6 208 IPR045277 GO:0003700
Arst10g03223 211 FunFam Ethylene-responsive transcription factor 2 35 96 - -
Arst10g03223 211 SUPERFAMILY DNA-binding domain 36 97 IPR016177 GO:0003677
Arst10g03223 211 Gene3D AP2/ERF domain 36 96 IPR036955 GO:0003700|GO:0006355
Arst10g03223 211 ProSiteProfiles AP2/ERF domain profile. 36 95 IPR001471 GO:0003700|GO:0006355
Arst10g03223 211 SMART rav1_2 36 101 IPR001471 GO:0003700|GO:0006355
Arst10g03223 211 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
Arst10g03223 211 PRINTS Ethylene responsive element binding protein signature 37 48 IPR001471 GO:0003700|GO:0006355
Arst10g03223 211 Pfam AP2 domain 35 87 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03223 Arst-Chr10 100751935 100752816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03223 10 209 AP2-EREBP Transcription Factor Family AT1G63030 49.029 2.93e-58 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst10g03223 AP2 2.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03223 - - gmx:100789097 221.861