Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03208 ATGCTGCTGCTGCTACTGGGTGCTATATATGCATCATGCATGCTTTTCTGCATCTGGAAATCATCTTTTGGATCGATTCGAACGGTGTATATGGCGAAGCAAAGTGTTTATCCTAATAAGGAACATGAAGGGATTGCTCACAATTCTTCAGGGCCCTGGTGGAGTCTCTTTGGATCTCAATATGGGGAATCTTGTGGCCAAATGAAACCCTTTTCACTGGAGATTCCTAACTATGTTGATCAAATTGACACCGGCAAGCAATCGGCGAGAGGAGCTGAAAACATATCTGGGAAAGGACATACAACTCAGTTTACCATCTTTCCAGATGATTGTAAAATGCCATGTGGTGCACAAAAGCCTCAAGCAGCCATATCTCTGCAGTCACCACTTGCTGATACTAACACTAGATTCGAGCTAGGATTCAACCAGCCAATGATCTGTGCAAAATATCCATATATGGATCAAATTTATGGGCTCTTCTCACCTTATGGACCTCAAATTTCGGGACGCATAATGCTGCCACTTAGCATGACATCCGATGATGGACCAATTTATGTGAATGCTAAGCAGTACCATGGAATCATCAGACGCCGGCAGTCCCGTGCCAAAGCTGTACTTGATAACAAATTGACAAAACGTCGCAAGCCATATATGCATGAATCACGTCATCTCCATGCAATGCGGCGACCAAGAGGATGTGGCGGTCGCTTCTTGAACACGAAGAATTCCGATGATCAAAATGATAAAAGTGGAAACAAAGTGATCAAAGCTCTTGGCGAACAGTTGCAATCTTGTGGCTCTCAGAGTTCTGAAGTGCTGCAATCTGAGGTTGGAACTCTGAATTCTTCAAAAGAGACTAATGGAAGCAGTCCGAATATTTCCGGGTCAGAGGTGACTAGCATGTATTCACGCGGAGGTCTCGATAGTTTTGCTATCAGTCATCTTGGTTCTGCCGTCACTGTCCACTCTCTAGTGGACATGATAGACGGCGGGAGGGGCATGAATATGATCATGCCCCCCAAATGGGTTGCAGCAGTTGGTGGCAATTGCTGCAACCTTAATGCTTGA 1068 0.4504 MLLLLLGAIYASCMLFCIWKSSFGSIRTVYMAKQSVYPNKEHEGIAHNSSGPWWSLFGSQYGESCGQMKPFSLEIPNYVDQIDTGKQSARGAENISGKGHTTQFTIFPDDCKMPCGAQKPQAAISLQSPLADTNTRFELGFNQPMICAKYPYMDQIYGLFSPYGPQISGRIMLPLSMTSDDGPIYVNAKQYHGIIRRRQSRAKAVLDNKLTKRRKPYMHESRHLHAMRRPRGCGGRFLNTKNSDDQNDKSGNKVIKALGEQLQSCGSQSSEVLQSEVGTLNSSKETNGSSPNISGSEVTSMYSRGGLDSFAISHLGSAVTVHSLVDMIDGGRGMNMIMPPKWVAAVGGNCCNLNA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03208 355 SMART cbf3 179 240 IPR001289 GO:0003700|GO:0006355
Arst10g03208 355 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 88 303 IPR001289 GO:0003700|GO:0006355
Arst10g03208 355 PRINTS CCAAT-binding transcription factor subunit B signature 214 237 IPR001289 GO:0003700|GO:0006355
Arst10g03208 355 PRINTS CCAAT-binding transcription factor subunit B signature 183 205 IPR001289 GO:0003700|GO:0006355
Arst10g03208 355 ProSiteProfiles NF-YA/HAP2 family profile. 180 240 IPR001289 GO:0003700|GO:0006355
Arst10g03208 355 MobiDBLite consensus disorder prediction 228 251 - -
Arst10g03208 355 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 183 237 IPR001289 GO:0003700|GO:0006355
Arst10g03208 355 Gene3D - 180 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03208 Arst-Chr10 100570118 100574012 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03208 16 353 CCAAT-HAP2 Transcription Factor Family AT3G05690 43.380 1.55e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Arst10g03208 CBFB_NFYA 8.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03208 K08064 - gmx:100527677 483.796