Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03195 ATGGGAAACAATTGTGTTGGATCCAGAGACTCCAAGGAAGGACTATTCTCCTTCTCCTATGTTGCTTCCACCCCATTCTGGTGGTCTAATCCAACAACCGCAATCCTAGAACCTCCTTCATGCACACAACCTGTTCAACAAAATGCTCCACAGCCCATCACGATTGATGCTCATCATCAACACTATTACAAACAAGAGGAGGATAAGCAGCAATCTAGGCAAGTAGTAGTTAGACCAGAAGAGACACCAAAAGCAAAACTTCAAAGTACTAAGAGGTCTGCAAGTGCAGGGCTTCGAGCAGACTCGGTTCTGCCGAGACAAACCGGCCACATTAAAGAGTACTTTCATTTGGGAGCTGAGCTTGGGCATGGACAATATGGAACAACTTTTCTTTGTGTAGAGAAGGCTACTGGAATCAAGTATGCATGCAAGTCCATTGCAAAAGTGAAGTTGCTTACAGATGATGATGTGGATGATGTGAGGAGGGAGATTCAGATAATGCATCACTTGGCGGGAAGCCCCAATGTGGTCTCCATCAAAGGGGCTTACGAGGATGCCATTGCGGTTCATGTTGTCATGGAGTTGTGTGCAGGGGGTGAGCTCTTTGATAGGATTGTGGAAAGGGGCCATTACACGGAAAAGAAGGCGGCAAAGCTTGTCAGGACTATTGTCAGTGTTGTGGAGGCTTGCCACTCCCTTGGAGTTATGCATCGTGATCTTAAGCCAGAGAATTTCCTTTTTCTTGATGTCCATGAAGATTCCATCCTCAAGGCAATAGATTTTGGAATGTCTGCTTTTTTCAAACCAGGAGACAAATTCACCGATGTGGTAGGAAGTCCTTACTATATTGCACCCGAAGTTCTGTGCAAGCATTATGGCCCAGAAGCAGATGTTTGGAGTGCTGGTGTGATGCTATACATTCTCTTATGTGGATTCCCTCCATTTTGGGGCGAATCAGAGCAAGAGATATTTCACGAGGTTTTGAATGGTGATCTTGATTTCTCTTCTGATCCTTGGTCGAGTATCTCTGAAAGTGCGAAAGACTTGGTGAGGGGCATGCTTGTTAGAGATCCAAGAAAACGGATTACAGCTCATGAAGTTCTTTGTCACCCTTGGATTCAAGAAAATGGAGTTGCTCCAGACAAGCCTTTAGATTCTACGGTTTTGAGTCGCCTGAAGCAGTTTTCTGCAATGAACAAGCTCAAGAAAATGGCTCTCAGAATTATTGCAGAGAATCTCTCTGAAGAAGAAATTTCAGGATTGAAAGAAATATTCAAGATGATAGACACGGACAACAGTGGTCAAATAACTTTTGAAGAATTCAAGGTTGGGCTGAGAACGTTTGGTGCTAATCTCAGCGAATCAGAAATTTACGATCTAATGCAAGCTGCAGATGTTGATAACAGTGGCACAATTGAGTATGGGGAATTCATAGCTGCAACAATGCATTTAAACAAAGTCAAAAGAGAAGAACATTTGGTCACAGCTTTCTCATACTTTGATAAAGATGGAAGTGGCTACATCACTCAAGATGAGCTTCAACAAGCTTGTGAAGAATTTGGCATGGAGGATGTCAGCTTGGATGAAATCATCCGAGAAGCTGATCAGAATAACGATGGCAGAATAGACTACAATGAATTTGTTGCAATGATGCAGAGAGGAGATACAGATTTAGGAAAGACTGGTGTAAAAGGTAGCACTAGTTTTAGAATTGGATTTAGGGAAGCACTTTCAGTATGTTGA 1743 0.4291 MGNNCVGSRDSKEGLFSFSYVASTPFWWSNPTTAILEPPSCTQPVQQNAPQPITIDAHHQHYYKQEEDKQQSRQVVVRPEETPKAKLQSTKRSASAGLRADSVLPRQTGHIKEYFHLGAELGHGQYGTTFLCVEKATGIKYACKSIAKVKLLTDDDVDDVRREIQIMHHLAGSPNVVSIKGAYEDAIAVHVVMELCAGGELFDRIVERGHYTEKKAAKLVRTIVSVVEACHSLGVMHRDLKPENFLFLDVHEDSILKAIDFGMSAFFKPGDKFTDVVGSPYYIAPEVLCKHYGPEADVWSAGVMLYILLCGFPPFWGESEQEIFHEVLNGDLDFSSDPWSSISESAKDLVRGMLVRDPRKRITAHEVLCHPWIQENGVAPDKPLDSTVLSRLKQFSAMNKLKKMALRIIAENLSEEEISGLKEIFKMIDTDNSGQITFEEFKVGLRTFGANLSESEIYDLMQAADVDNSGTIEYGEFIAATMHLNKVKREEHLVTAFSYFDKDGSGYITQDELQQACEEFGMEDVSLDEIIREADQNNDGRIDYNEFVAMMQRGDTDLGKTGVKGSTSFRIGFREALSVC 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03195 580 SMART serkin_6 115 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03195 580 FunFam Calcium-dependent protein kinase 1 117 200 - -
Arst10g03195 580 SUPERFAMILY EF-hand 412 553 IPR011992 -
Arst10g03195 580 ProSitePatterns EF-hand calcium-binding domain. 535 547 IPR018247 -
Arst10g03195 580 MobiDBLite consensus disorder prediction 64 97 - -
Arst10g03195 580 CDD STKc_CAMK 115 372 - -
Arst10g03195 580 SUPERFAMILY Protein kinase-like (PK-like) 106 396 IPR011009 -
Arst10g03195 580 PANTHER SERINE/THREONINE-PROTEIN KINASE 107 547 - -
Arst10g03195 580 ProSitePatterns EF-hand calcium-binding domain. 429 441 IPR018247 -
Arst10g03195 580 Gene3D - 384 556 - -
Arst10g03195 580 FunFam Calcium-dependent protein kinase SK5 201 385 - -
Arst10g03195 580 Pfam EF-hand domain pair 421 481 IPR002048 GO:0005509
Arst10g03195 580 Pfam EF-hand domain pair 491 552 IPR002048 GO:0005509
Arst10g03195 580 Gene3D Phosphorylase Kinase; domain 1 117 200 - -
Arst10g03195 580 CDD EFh 496 552 IPR002048 GO:0005509
Arst10g03195 580 ProSiteProfiles Protein kinase domain profile. 115 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03195 580 ProSitePatterns EF-hand calcium-binding domain. 465 477 IPR018247 -
Arst10g03195 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Arst10g03195 580 ProSiteProfiles EF-hand calcium-binding domain profile. 452 487 IPR002048 GO:0005509
Arst10g03195 580 ProSiteProfiles EF-hand calcium-binding domain profile. 527 557 IPR002048 GO:0005509
Arst10g03195 580 Gene3D Transferase(Phosphotransferase) domain 1 201 383 - -
Arst10g03195 580 Pfam Protein kinase domain 116 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03195 580 ProSitePatterns Protein kinases ATP-binding region signature. 121 148 IPR017441 GO:0005524
Arst10g03195 580 ProSiteProfiles EF-hand calcium-binding domain profile. 416 451 IPR002048 GO:0005509
Arst10g03195 580 CDD EFh 421 480 IPR002048 GO:0005509
Arst10g03195 580 ProSitePatterns EF-hand calcium-binding domain. 501 513 IPR018247 -
Arst10g03195 580 ProSiteProfiles EF-hand calcium-binding domain profile. 488 523 IPR002048 GO:0005509
Arst10g03195 580 SMART efh_1 420 448 IPR002048 GO:0005509
Arst10g03195 580 SMART efh_1 526 554 IPR002048 GO:0005509
Arst10g03195 580 SMART efh_1 456 484 IPR002048 GO:0005509
Arst10g03195 580 SMART efh_1 492 520 IPR002048 GO:0005509
Arst10g03195 580 FunFam Calcium-dependent protein kinase 1 381 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03195 Arst-Chr10 100405957 100409910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03195 91 574 EF-hand Containing Proteins AT5G04870 75.620 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Arst10g03195 Pkinase 3.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03195 K13412 - cave:132191719 831.247