Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03191 ATGGAGGTACCAGGGATGGAAGGCAAGGCTGAGAGTCAAATGACTTCGGCTGCGGCCTTCGTCGAAGGAGGGATTCAAGAATCATGTGATGATGCTTGCAGCATATGCCTTGAGGATTTCTCCGAAAGTGATCCTTCGACAACCACTGCATGCAGGCATGAGTTTCACCTTCAATGTGTTCTTGAATGGTGCCAGAGAAGCTCTCAGTGCCCTATGTGTTGGCAACCTATTAGCATGAAGGATCCAACCAGTCAAGAGCTGTTTGAGGCAGTAGAACGGGAAAGGAAGTTGAGGGCTATCGCACCAAGGACTGCTGCTATCTTTCACCACCCTGCCTTTGGTGATTTTGGACTGCAGCATTTAGGCATAAGTGATGCTGATCTTGAACAACGAATAATTCAACATTTAGCTGCAGCAGCAGCAGTTGGGAGATCACACCATCATGGTCGGAGGGAAGGGCATCAAACTAGGGCATCTGCTCATGGTCATCCACCCGTTATAGTTTTGTCATCTCAGCCAAGTTCACCGCAAGTCCCTGAATCAGCTCCTAGAGGGGGAGATGAACCAGCTACAAATCCTTTAGGAACTCCATCTAGTCCTATGACTTCCCGTGGAGGTGAAATATCACGGCAGATCCCACATCTTCAGACTCAAAGCTCTTCTTCAGCTCCTCGGGATAGAGACTCTATTGCGCAATCTTCTCCAGCAAACCAAGATAGAGCAGGGCCATCAGAATCCCAGTCCATTTCTGATTCTCTGCGGGCCCGATTTAGTGCGTTGTCCATGAGATACAAAGAGTCAATTTCAAAAGGCGCAAGGGGATGGAAGGAGAGGCTGTTCTGTCATGGTTCTTCCATGTCAAAAGTTGGCTCAGAAGCTAGGAGAGAGGCTGGAATTGCCGGCGTCACACAATTGGTGCAATCCCAATCTCTTCAAAATAGAGCAACTTATAGAACTGCGACTACCTCTTTGTCAAATCATTTGGAGGATCATCCCACTGGAGAGGTGACCAACCAGAACAGGGGAGCTAGAAGAGAAAATGCATCGCATGATAACACTCCAGCTGCTTGTTCTGCTAGCTCACGTTCGAATTGA 1095 0.4831 MEVPGMEGKAESQMTSAAAFVEGGIQESCDDACSICLEDFSESDPSTTTACRHEFHLQCVLEWCQRSSQCPMCWQPISMKDPTSQELFEAVERERKLRAIAPRTAAIFHHPAFGDFGLQHLGISDADLEQRIIQHLAAAAAVGRSHHHGRREGHQTRASAHGHPPVIVLSSQPSSPQVPESAPRGGDEPATNPLGTPSSPMTSRGGEISRQIPHLQTQSSSSAPRDRDSIAQSSPANQDRAGPSESQSISDSLRARFSALSMRYKESISKGARGWKERLFCHGSSMSKVGSEARREAGIAGVTQLVQSQSLQNRATYRTATTSLSNHLEDHPTGEVTNQNRGARRENASHDNTPAACSASSRSN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03191 364 ProSiteProfiles Zinc finger RING-type profile. 33 73 IPR001841 -
Arst10g03191 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 11 83 IPR013083 -
Arst10g03191 364 SUPERFAMILY RING/U-box 26 81 - -
Arst10g03191 364 MobiDBLite consensus disorder prediction 192 251 - -
Arst10g03191 364 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 19 82 - -
Arst10g03191 364 Pfam Ring finger domain 32 73 IPR001841 -
Arst10g03191 364 SMART ring_2 33 73 IPR001841 -
Arst10g03191 364 MobiDBLite consensus disorder prediction 139 251 - -
Arst10g03191 364 MobiDBLite consensus disorder prediction 319 343 - -
Arst10g03191 364 MobiDBLite consensus disorder prediction 319 364 - -
Arst10g03191 364 FunFam E3 ubiquitin-protein ligase RHF2A isoform X1 11 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03191 Arst-Chr10 100363463 100368347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03191 30 81 C3H Transcription Factor Family AT4G00335 48.077 2.06e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03191 K19043 - gmx:100800419 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03191 10 100363463 100368347 Arst10g03191 10 100363463 100368347 ECH