Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03190 ATGGAGAAGGTACCAGGGATGGAAGGCAAGGCTGAGAGTCAAATGACTTCGGCTGCGGCCTTCGTCGAAGGAGGGATTCAAGAATCATGTGATGATGCTTGCAGCATATGCCTTGAGGATTTCTCCGAAAGTGATCCTTCGACAACCACTGCATGCAGGCATGAGTTTCACCTTCAATGTGTTCTTGAATGGTGCCAGAGAAGCTCTCAGTGCCCTATGTGTTGGCAACCTATTAGCATGAAGGATCCAACCAGTCAAGAGCTGTTTGAGGCAGTAGAACGGGAAAGGAAGTTGAGGGCTATCGCACCAAGGACTGCTGCTATCTTTCACCACCCTGCCTTTGGTGATTTTGGACTGCAGCATTTAGGCATAAGTGATGCTGATCTTGAACAACGAATAATTCAACATTTAGCTGCAGCAGCAGCAGTTGGGAGATCACACCATCATGGTCGGAGGGAAGGGCATCAAACTAGGGCATCTGCTCATGGTCATCCACCCGTTATAGTTTTGTCATCTCAGCCAAGTTCACCGCAAGTCCCTGAATCAGCTCCTAGAGGGGGAGATGAACCAGCTACAAATCCTTTAGGAACTCCATCTAGTCCTATGACTTCCCGTGGAGGTGAAATATCACGGCAGATCCCACATCTTCAGACTCAAAGCTCTTCTTCAGCTCCTCGGGATAGAGACTCTATTGCGCAATCTTCTCCAGCAAACCAAGATAGAGCAGGGCCATCAGAATCCCAGTCCATTTCTGATTCTCTGCGGGCCCGATTTAGTGCGTTGTCCATGAGATACAAAGAGTCAATTTCAAAAGGCGCAAGGGGATGGAAGGAGAGGCTGTTCTGTCATGGTTCTTCCATGTCAAAAGTTGGCTCAGAAGCTAGGAGAGAGGCTGGAATTGCCGGCGTCACACAATTGGTGCAATCCCAATCTCTTCAAAATAGAGCAACTTATAGAACTGCGACTACCTCTTTGTCAAATCATTTGGAGGATCATCCCACTGGAGAGGTGACCAACCAGAACAGGGGAGCTAGAAGAGAAAATGCATCGCATGATAACACTCCAGCTGCTTGTTCTGCTAGCTCACGTTCGAATTGA 1098 0.4827 MEKVPGMEGKAESQMTSAAAFVEGGIQESCDDACSICLEDFSESDPSTTTACRHEFHLQCVLEWCQRSSQCPMCWQPISMKDPTSQELFEAVERERKLRAIAPRTAAIFHHPAFGDFGLQHLGISDADLEQRIIQHLAAAAAVGRSHHHGRREGHQTRASAHGHPPVIVLSSQPSSPQVPESAPRGGDEPATNPLGTPSSPMTSRGGEISRQIPHLQTQSSSSAPRDRDSIAQSSPANQDRAGPSESQSISDSLRARFSALSMRYKESISKGARGWKERLFCHGSSMSKVGSEARREAGIAGVTQLVQSQSLQNRATYRTATTSLSNHLEDHPTGEVTNQNRGARRENASHDNTPAACSASSRSN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03190 365 MobiDBLite consensus disorder prediction 322 344 - -
Arst10g03190 365 SUPERFAMILY RING/U-box 26 82 - -
Arst10g03190 365 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 20 83 - -
Arst10g03190 365 MobiDBLite consensus disorder prediction 322 365 - -
Arst10g03190 365 MobiDBLite consensus disorder prediction 193 252 - -
Arst10g03190 365 Pfam Ring finger domain 33 74 IPR001841 -
Arst10g03190 365 MobiDBLite consensus disorder prediction 140 252 - -
Arst10g03190 365 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 84 IPR013083 -
Arst10g03190 365 SMART ring_2 34 74 IPR001841 -
Arst10g03190 365 FunFam E3 ubiquitin-protein ligase RHF2A isoform X1 12 84 - -
Arst10g03190 365 ProSiteProfiles Zinc finger RING-type profile. 34 74 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03190 Arst-Chr10 100363463 100368347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03190 31 82 C3H Transcription Factor Family AT4G00335 48.077 2.03e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03190 K19043 - gmx:100800419 438.728