Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03180 ATGATGAAATCTCCGACTACAAGCCCTTCAGTGACGATGATGATATTCTTCAGTGATGTGACATATAAGGTAGTGATGAAAGGAATGACAACAAGTGAGGAGAAGGATATACTGAAGGGTATAACTGGTTGTGTGAGTCCAGGGGAAGTTTTGGCATTGATGGGACCCTCAGGAAGTGGAAAAACATCACTGCTGAATCTTCTTGGAGGAAGAATAACTCATCACCCCACTGTTGGTGGATCTATCACCTACAATGACCAGCCTTATTCTAAGTTCCTCAAGAGTAGGATTGGATTTGTGACACAAGATGATGTTCTGTTTCCTCATCTAACTGTAAAAGAAACATTGACATATGCAGCCAGACTAAGATTGCCAAATACATTAACTCAGGAGCAAAAGGAACAACGTGCTTTAGATGTCATCTATGAGCTTGGTTTGGAAAGGTGCCAAGACACTATGATAGGAGGATCCTTTGTTCGAGGAGTATCTGGGGGAGAGAGGAAGAGAGTCTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTTCTTCTTGATGAACCAACTTCTGGCCTCGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTACAACACATAGCAGAGGCTGGTAAAACGGTAGTGACAACAATCCATCAACCATCAAGCAGGCTCTTCCATAAATTTGATAAGTTGATCCTTTTAGGAAAAGGGAGCTTGATTTACTTTGGAAAAGCATCTGAAGCTATGTCTTACTTCCAGTACATAGGGTGTTCACCTCTCATCACCATGAACCCAGCAGAGTTTCTACTTGACCTTGCAAATGGTAACATAAATGATGTTTCTGTTCCATCAGAGTTAGAGGATAAAGTTCAAATGGGGAATTTGTCAGAAGCTGAAACTCGCAATGGGAAACCATCACCTGCACTTGTGCAAGAGTATCTAGTGGAGGCGTATGAGACTAGAGTTGCTGAAACAGAAAAGAAAAAGCTACTGGTTCCTATCCCCCTTGATGAAGAACTCAAGTCTAAGGTTCTTTGTTCTAAAAGACAATGGGGAGCAAGTTGGTGTGAGCAATTTTCCATCTTGTTCTTGAGAGGATTCAAAGAAAGGAGGCATGACTATTTCAGCTGGTTGAGAATCACACAAGTTCTATCCACAGCAGTCATCTTAGGATTGCTATGGTGGCAATCAGATGCTAAAAACCCAAAAGGCATGCAAGACCAGGCAGGACTACTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCTGTCTTCACTGCAATATTCACATTCCCACAAGAGAGAGCAATGTTAAATAAGGAAAGAGCAACAGATATGTATAGACTAAGTGCATATTTTGTGGCAAGAACTACAAGTGACCTTCCATTAGACCTTATCTTACCAGTGCTTTTCCTCTTAGTTGTTTACTTCATGGCTGGATTGAGACTCAGTGCAGGACCATTCTTGCTTAGCATCCTTACAGTTTTTCTCTGCATAGTTGCAGCTCAGGGACTTGGACTTGCTATTGGGGCAACACTAATGGACTTGAAAAGGGCAACAACATTGGCTTCAGTTACTGTAATGACTTTCATGCTTGCTGGAGGCTTTTTTGTGAAGAGGGTGCCGATATTTATATCATGGATCCGGTACATATCTTTCAACTACCACACGTACAAACTTCTGCTGAAGGTGCAATATGATGAAGAAGTGACACCAATGATAAATGGAATCAGAATTGATAGTGGCTCAACAGAGGTGGTTGCTCTGATAGCAATGGTTTTTGGTTACCGTCTATTGGCATATCTTTCCTTGCGTTGGATGAATGTTTCATAA 1836 0.4145 MMKSPTTSPSVTMMIFFSDVTYKVVMKGMTTSEEKDILKGITGCVSPGEVLALMGPSGSGKTSLLNLLGGRITHHPTVGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPNTLTQEQKEQRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLLLDEPTSGLDSTTALRIVQMLQHIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLIYFGKASEAMSYFQYIGCSPLITMNPAEFLLDLANGNINDVSVPSELEDKVQMGNLSEAETRNGKPSPALVQEYLVEAYETRVAETEKKKLLVPIPLDEELKSKVLCSKRQWGASWCEQFSILFLRGFKERRHDYFSWLRITQVLSTAVILGLLWWQSDAKNPKGMQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERATDMYRLSAYFVARTTSDLPLDLILPVLFLLVVYFMAGLRLSAGPFLLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKRVPIFISWIRYISFNYHTYKLLLKVQYDEEVTPMINGIRIDSGSTEVVALIAMVFGYRLLAYLSLRWMNVS 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03180 611 SMART AAA_5 47 239 IPR003593 GO:0016887
Arst10g03180 611 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 256 IPR027417 -
Arst10g03180 611 ProSitePatterns ABC transporters family signature. 162 176 IPR017871 GO:0005524|GO:0016887
Arst10g03180 611 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 262 IPR003439 GO:0005524
Arst10g03180 611 Pfam ABC-2 type transporter 219 281 IPR043926 GO:0140359
Arst10g03180 611 Gene3D - 15 256 IPR027417 -
Arst10g03180 611 FunFam ABC transporter G family member 22 25 256 - -
Arst10g03180 611 Pfam ABC transporter 38 190 IPR003439 GO:0005524
Arst10g03180 611 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 602 - -
Arst10g03180 611 Pfam ABC-2 type transporter 358 567 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03180 Arst-Chr10 100310576 100317879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03180 37 291 Calmodulin-binding Proteins AT2G36910 27.203 7.01e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03180 K05681 - gmx:100800934 1027.7