Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03179 ATGAAAGGAATGACAACAAGTGAGGAGAAGGATATACTGAAGGGTATAACTGGTTGTGTGAGTCCAGGGGAAGTTTTGGCATTGATGGGACCCTCAGGAAGTGGAAAAACATCACTGCTGAATCTTCTTGGAGGAAGAATAACTCATCACCCCACTGTTGGTGGATCTATCACCTACAATGACCAGCCTTATTCTAAGTTCCTCAAGAGTAGGATTGGATTTGTGACACAAGATGATGTTCTGTTTCCTCATCTAACTGTAAAAGAAACATTGACATATGCAGCCAGACTAAGATTGCCAAATACATTAACTCAGGAGCAAAAGGAACAACGTGCTTTAGATGTCATCTATGAGCTTGGTTTGGAAAGGTGCCAAGACACTATGATAGGAGGATCCTTTGTTCGAGGAGTATCTGGGGGAGAGAGGAAGAGAGTCTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTTCTTCTTGATGAACCAACTTCTGGCCTCGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTACAACACATAGCAGAGGCTGGTAAAACGGTAGTGACAACAATCCATCAACCATCAAGCAGGCTCTTCCATAAATTTGATAAGTTGATCCTTTTAGGAAAAGGGAGCTTGATTTACTTTGGAAAAGCATCTGAAGCTATGTCTTACTTCCAGTACATAGGGTGTTCACCTCTCATCACCATGAACCCAGCAGAGTTTCTACTTGACCTTGCAAATGGTAACATAAATGATGTTTCTGTTCCATCAGAGTTAGAGGATAAAGTTCAAATGGGGAATTTGTCAGAAGCTGAAACTCGCAATGGGAAACCATCACCTGCACTTGTGCAAGAGTATCTAGTGGAGGCGTATGAGACTAGAGTTGCTGAAACAGAAAAGAAAAAGCTACTGGTTCCTATCCCCCTTGATGAAGAACTCAAGTCTAAGGTTCTTTGTTCTAAAAGACAATGGGGAGCAAGTTGGTGTGAGCAATTTTCCATCTTGTTCTTGAGAGGATTCAAAGAAAGGAGGCATGACTATTTCAGCTGGTTGAGAATCACACAAGTTCTATCCACAGCAGTCATCTTAGGATTGCTATGGTGGCAATCAGATGCTAAAAACCCAAAAGGCATGCAAGACCAGGCAGGACTACTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCTGTCTTCACTGCAATATTCACATTCCCACAAGAGAGAGCAATGTTAAATAAGGAAAGAGCAACAGATATGTATAGACTAAGTGCATATTTTGTGGCAAGAACTACAAGTGACCTTCCATTAGACCTTATCTTACCAGTGCTTTTCCTCTTAGTTGTTTACTTCATGGCTGGATTGAGACTCAGTGCAGGACCATTCTTGCTTAGCATCCTTACAGTTTTTCTCTGCATAGTTGCAGCTCAGGGACTTGGACTTGCTATTGGGGCAACACTAATGGACTTGAAAAGGGCAACAACATTGGCTTCAGTTACTGTAATGACTTTCATGCTTGCTGGAGGCTTTTTTGTGAAGAGGGTGCCGATATTTATATCATGGATCCGGTACATATCTTTCAACTACCACACGTACAAACTTCTGCTGAAGGTGCAATATGATGAAGAAGTGACACCAATGATAAATGGAATCAGAATTGATAGTGGCTCAACAGAGGTGGTTGCTCTGATAGCAATGGTTTTTGGTTACCGTCTATTGGCATATCTTTCCTTGCGTTGGATGAATGTTTCATAA 1761 0.4151 MKGMTTSEEKDILKGITGCVSPGEVLALMGPSGSGKTSLLNLLGGRITHHPTVGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPNTLTQEQKEQRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLLLDEPTSGLDSTTALRIVQMLQHIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLIYFGKASEAMSYFQYIGCSPLITMNPAEFLLDLANGNINDVSVPSELEDKVQMGNLSEAETRNGKPSPALVQEYLVEAYETRVAETEKKKLLVPIPLDEELKSKVLCSKRQWGASWCEQFSILFLRGFKERRHDYFSWLRITQVLSTAVILGLLWWQSDAKNPKGMQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERATDMYRLSAYFVARTTSDLPLDLILPVLFLLVVYFMAGLRLSAGPFLLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKRVPIFISWIRYISFNYHTYKLLLKVQYDEEVTPMINGIRIDSGSTEVVALIAMVFGYRLLAYLSLRWMNVS 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03179 586 SMART AAA_5 22 214 IPR003593 GO:0016887
Arst10g03179 586 FunFam ABC transporter G family member 22 1 231 - -
Arst10g03179 586 Gene3D - 4 231 IPR027417 -
Arst10g03179 586 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 9 577 - -
Arst10g03179 586 Pfam ABC-2 type transporter 194 256 IPR043926 GO:0140359
Arst10g03179 586 Pfam ABC-2 type transporter 333 542 IPR013525 GO:0016020|GO:0140359
Arst10g03179 586 Pfam ABC transporter 13 165 IPR003439 GO:0005524
Arst10g03179 586 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 237 IPR003439 GO:0005524
Arst10g03179 586 ProSitePatterns ABC transporters family signature. 137 151 IPR017871 GO:0005524|GO:0016887
Arst10g03179 586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 231 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03179 Arst-Chr10 100310572 100317879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03179 12 266 Calmodulin-binding Proteins AT2G36910 27.203 7.26e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03179 K05681 - gmx:100800934 1007.28