Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03178 ATGGGGATAAATGTGCAGTTCAGTGATGTGACATATAAGGTAGTGATGAAAGGAATGACAACAAGTGAGGAGAAGGATATACTGAAGGGTATAACTGGTTGTGTGAGTCCAGGGGAAGTTTTGGCATTGATGGGACCCTCAGGAAGTGGAAAAACATCACTGCTGAATCTTCTTGGAGGAAGAATAACTCATCACCCCACTGTTGGTGGATCTATCACCTACAATGACCAGCCTTATTCTAAGTTCCTCAAGAGTAGGATTGGATTTGTGACACAAGATGATGTTCTGTTTCCTCATCTAACTGTAAAAGAAACATTGACATATGCAGCCAGACTAAGATTGCCAAATACATTAACTCAGGAGCAAAAGGAACAACGTGCTTTAGATGTCATCTATGAGCTTGGTTTGGAAAGGTGCCAAGACACTATGATAGGAGGATCCTTTGTTCGAGGAGTATCTGGGGGAGAGAGGAAGAGAGTCTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTCTTCTTCTTGATGAACCAACTTCTGGCCTCGATTCTACAACAGCCTTGAGGATTGTTCAGATGCTACAACACATAGCAGAGGCTGGTAAAACGGTAGTGACAACAATCCATCAACCATCAAGCAGGCTCTTCCATAAATTTGATAAGTTGATCCTTTTAGGAAAAGGGAGCTTGATTTACTTTGGAAAAGCATCTGAAGCTATGTCTTACTTCCAGTACATAGGGTGTTCACCTCTCATCACCATGAACCCAGCAGAGTTTCTACTTGACCTTGCAAATGGTAACATAAATGATGTTTCTGTTCCATCAGAGTTAGAGGATAAAGTTCAAATGGGGAATTTGTCAGAAGCTGAAACTCGCAATGGGAAACCATCACCTGCACTTGTGCAAGAGTATCTAGTGGAGGCGTATGAGACTAGAGTTGCTGAAACAGAAAAGAAAAAGCTACTGGTTCCTATCCCCCTTGATGAAGAACTCAAGTCTAAGGTTCTTTGTTCTAAAAGACAATGGGGAGCAAGTTGGTGTGAGCAATTTTCCATCTTGTTCTTGAGAGGATTCAAAGAAAGGAGGCATGACTATTTCAGCTGGTTGAGAATCACACAAGTTCTATCCACAGCAGTCATCTTAGGATTGCTATGGTGGCAATCAGATGCTAAAAACCCAAAAGGCATGCAAGACCAGGCAGGACTACTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCTGTCTTCACTGCAATATTCACATTCCCACAAGAGAGAGCAATGTTAAATAAGGAAAGAGCAACAGATATGTATAGACTAAGTGCATATTTTGTGGCAAGAACTACAAGTGACCTTCCATTAGACCTTATCTTACCAGTGCTTTTCCTCTTAGTTGTTTACTTCATGGCTGGATTGAGACTCAGTGCAGGACCATTCTTGCTTAGCATCCTTACAGTTTTTCTCTGCATAGTTGCAGCTCAGGGACTTGGACTTGCTATTGGGGCAACACTAATGGACTTGAAAAGGGCAACAACATTGGCTTCAGTTACTGTAATGACTTTCATGCTTGCTGGAGGCTTTTTTGTGAAGAGGGTGCCGATATTTATATCATGGATCCGGTACATATCTTTCAACTACCACACGTACAAACTTCTGCTGAAGGTGCAATATGATGAAGAAGTGACACCAATGATAAATGGAATCAGAATTGATAGTGGCTCAACAGAGGTGGTTGCTCTGATAGCAATGGTTTTTGGTTACCGTCTATTGGCATATCTTTCCTTGCGTTGGATGAATGTTTCATAA 1806 0.4147 MGINVQFSDVTYKVVMKGMTTSEEKDILKGITGCVSPGEVLALMGPSGSGKTSLLNLLGGRITHHPTVGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPNTLTQEQKEQRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLLLDEPTSGLDSTTALRIVQMLQHIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLIYFGKASEAMSYFQYIGCSPLITMNPAEFLLDLANGNINDVSVPSELEDKVQMGNLSEAETRNGKPSPALVQEYLVEAYETRVAETEKKKLLVPIPLDEELKSKVLCSKRQWGASWCEQFSILFLRGFKERRHDYFSWLRITQVLSTAVILGLLWWQSDAKNPKGMQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERATDMYRLSAYFVARTTSDLPLDLILPVLFLLVVYFMAGLRLSAGPFLLSILTVFLCIVAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKRVPIFISWIRYISFNYHTYKLLLKVQYDEEVTPMINGIRIDSGSTEVVALIAMVFGYRLLAYLSLRWMNVS 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03178 601 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 592 - -
Arst10g03178 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 246 IPR027417 -
Arst10g03178 601 Pfam ABC transporter 28 180 IPR003439 GO:0005524
Arst10g03178 601 ProSitePatterns ABC transporters family signature. 152 166 IPR017871 GO:0005524|GO:0016887
Arst10g03178 601 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 5 252 IPR003439 GO:0005524
Arst10g03178 601 Gene3D - 4 246 IPR027417 -
Arst10g03178 601 Pfam ABC-2 type transporter 348 557 IPR013525 GO:0016020|GO:0140359
Arst10g03178 601 FunFam ABC transporter G family member 22 15 246 - -
Arst10g03178 601 SMART AAA_5 37 229 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03178 Arst-Chr10 100310572 100317879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03178 27 281 Calmodulin-binding Proteins AT2G36910 27.203 7.45e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03178 K05681 - gmx:100800934 1024.62