Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03169 ATGGTTCGTCAAGCTGATTTAGTAATTCTTGGTGTCTCTGTTGGTTTGGCCCTTGGAATTCTGATATCTTGTGCCATATTTTTTGGCATAAGGTGGTACAAGAAACGTGTGAATATTGGACGATCTGCAAATGAGAATAGTGTAACAACTCTTCCAATACGAACAAATGGATTGGGAACAAGCACTGACATCAGTGCTTCTATAACTAGTTCCATAGCTCCATCAAGATATGATAATGTACAGAAAAATTCTCATTTCAGCTGGTGGAGTAATCAAAGCAAAGATCGTTTTGCTTCAGCATCAGGCATTTTAAAGTACTCGTATAGGGAAATTCAAAAGGCAACACAAAATTTCACAACTTCCTTGGGGCAAGGATCATTTGGCACAGTTTATAAAGCCACAATGGCTACAGGGGAGGTGGTAGCTGTGAAGGTTCTTGCGCCTAATTCCAAACAAGGGGAGAAAGAATTCCAAACGGAGGTGCTTCTGCTTGGAAGACTGCATCATCGAAATCTTGTGAATTTGATTGGATATTGTGTAGATAAAGGACAGCGCATACTTGTCTATCAGTTCATGAGTAATGGAAGTTTAGCTAATCTTTTATATGGTGAAGAAAAACAATTGAGTTGGGACGATCGGCTGCAAGTTGCTCTTGATATTTCACATGGAATAGAGTACCTTCACGAAGGGGCAGTTCCACCTGTCATACATCGTGACTTGAAGTCTGCCAACATATTACTAGATCACTCAATGAGAGCTAAGGTTGCCGACTTCGGGCTGTCAAAGGAAGAGGTATTTGATGGCCGGAATTCTGGTCTGAAAGGTACTTATGGTTACATGGACCCCGCGTATATTTCGACAAGCAAGTTAACAATGAAGAGTGACATCTACAGTTTCGGTGTCATAATATTTGAGCTCATCACTGCCATCCACCCACATCAAAACTTGATGGAGTACATTAACCTTGCTGCTATGGATCACAATGGTGTAGATGAAATTCTTGACAAGCAACTCGTTGGAAAATGCAACCTTGGAGAAGTGAGGCAGCTCGCTAAGATTGCACACAAATGCTTGCACAAATCACCTAAGAAACGCCCTTCGATAAGCGAGGTTTCACAGGGCATATCGAGGATAAAGCAAAGGCGGCTGCGCCATATGATGGAAGCTTCCATGTCATTTGCCAGCAACAACTTTTCGAGAGCCGTTAGTAGATTGGAAGATCAACAACTTGAGTTGAGTAGAATAACCCCCAGAACCACCATTAGCATAGGAGAAACTGGATGA 1284 0.4198 MVRQADLVILGVSVGLALGILISCAIFFGIRWYKKRVNIGRSANENSVTTLPIRTNGLGTSTDISASITSSIAPSRYDNVQKNSHFSWWSNQSKDRFASASGILKYSYREIQKATQNFTTSLGQGSFGTVYKATMATGEVVAVKVLAPNSKQGEKEFQTEVLLLGRLHHRNLVNLIGYCVDKGQRILVYQFMSNGSLANLLYGEEKQLSWDDRLQVALDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEVFDGRNSGLKGTYGYMDPAYISTSKLTMKSDIYSFGVIIFELITAIHPHQNLMEYINLAAMDHNGVDEILDKQLVGKCNLGEVRQLAKIAHKCLHKSPKKRPSISEVSQGISRIKQRRLRHMMEASMSFASNNFSRAVSRLEDQQLELSRITPRTTISIGETG 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03169 427 Pfam Protein tyrosine and serine/threonine kinase 118 373 IPR001245 GO:0004672|GO:0006468
Arst10g03169 427 SUPERFAMILY Protein kinase-like (PK-like) 86 372 IPR011009 -
Arst10g03169 427 SMART serkin_6 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03169 427 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Arst10g03169 427 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 192 401 - -
Arst10g03169 427 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 90 191 - -
Arst10g03169 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Arst10g03169 427 CDD STKc_IRAK 122 378 - -
Arst10g03169 427 Gene3D Transferase(Phosphotransferase) domain 1 192 400 - -
Arst10g03169 427 ProSiteProfiles Protein kinase domain profile. 116 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst10g03169 427 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Arst10g03169 427 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 390 - -
Arst10g03169 427 Gene3D Phosphorylase Kinase; domain 1 79 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03169 Arst-Chr10 100186787 100191825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03169 86 380 Receptor kinase-like Gene Family AT1G79620 43.871 8.48e-73 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Arst10g03169 PK_Tyr_Ser-Thr 2.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03169 - - gmx:100819995 725.317