Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03164 ATGGGTTCTGTTTGTTGCTGTCTGAGTTTTGATGATTTTGAAGATTATGTAAATCCAAATAGTTCTGTATATAGGAACTGCGTCTGTCTCAGTTGCCTGATACAGAACCTTTTGAACGTGTATGCATCAATATTCCGCAGAGGGGAAGTTCATTCAGCTCCTTCATCCATTCAGGGGGCTGCATCCATGACCTCTGCAGCATCACTTGATAATTCTCTATCGGACATGTACCGTTCTCCTCCAAGGCCATTACCATATGATGCGGATTCGAGGTTTTTCCGCGCACGTGATGGGCTAGTTTCAAGGCGTGAGAAGGGTTCAAGTCATTCGAATGAGGAAACAGAGCCTTTAAGAAGTAATACAGACGTTGATACAGAATCTCTGAATTCAGGAGACAAATGGAATGACTGTGCCTGTGAAGACGGGTCAAAAGAATACCGTTCGAAGTCCTCACTAAGAGTTTCATCAGCAAAATATGCAACTGGAGTTGGCCTTGTCTATGCATCATCAGAAGAGGAGGATGTCTGTCCGACTTGCCTTGAAGAATACACTACCGAGAATCCGAAGATAATGACAAAATGCTCTCACCATTTTCATCTCGGTTGCATTTATGAGTGGATGGAGAGAAGTGACAACTGTCCAGTTTGTGGAAAGGTGATGGTATTCGATGAAACGACATACTCTTGA 687 0.4338 MGSVCCCLSFDDFEDYVNPNSSVYRNCVCLSCLIQNLLNVYASIFRRGEVHSAPSSIQGAASMTSAASLDNSLSDMYRSPPRPLPYDADSRFFRARDGLVSRREKGSSHSNEETEPLRSNTDVDTESLNSGDKWNDCACEDGSKEYRSKSSLRVSSAKYATGVGLVYASSEEEDVCPTCLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPVCGKVMVFDETTYS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03164 228 MobiDBLite consensus disorder prediction 100 129 - -
Arst10g03164 228 SMART ring_2 176 216 IPR001841 -
Arst10g03164 228 ProSiteProfiles Zinc finger RING-type profile. 176 216 IPR001841 -
Arst10g03164 228 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 60 224 - -
Arst10g03164 228 CDD RING-H2_AIRP1-like 172 220 - -
Arst10g03164 228 FunFam E3 ubiquitin-protein ligase At3g02290-like 153 223 - -
Arst10g03164 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 223 IPR013083 -
Arst10g03164 228 MobiDBLite consensus disorder prediction 100 120 - -
Arst10g03164 228 Pfam RING-H2 zinc finger domain 171 216 IPR024766 GO:0008270
Arst10g03164 228 SUPERFAMILY RING/U-box 171 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03164 Arst-Chr10 100124324 100129193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03164 1 224 C3H Transcription Factor Family AT5G38895 56.000 9.20e-93 273