Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03149 ATGAGGCTTGTCATCTTAGTTCTTTGTGTAATTGTGTTGTTCTCCTATGCAGGTGCCTATGATCCTTTGGATCCAAATGGGAATGTAACAATCAAATGGGATATAGTGTCTTGGACTCCAGATGGCTATGTTGCGGACGTAACGTTGTACAACTTCCAAATGTTCCGGCACATAATGAACCCTGGATGGACCCTGGGATGGACATGGGCAAAGAAAGAAGTGATATGGTCTATGATAGGAGCTCAAACAACAGAGCAAGGTGACTGCTCAAAGTTCAAAGGGAACATACCTCACTGCTGCAAGAAAATCCCAACAGTTGTGGACTTGCTTCCTGGTGTCCCTTACAACCAGCAATTCACAAATTGCTGTAAGGGTGGAGTTGTTGCTGCGTGGGGCCAAGACCCTTCACAGGCTATCTCTTCATTCCAAATAAGTGTTGGCCAAGCCGGTACCTCCAACAAGACGGTTAAACTCCCCAAGAACTTCACTCTCTTGGCTCCCGGACCGGGATACACTTGCGGCCGGGCCAAGGTTGTTCCTTCCACCACTTTCCTTACTCCGGACAAGCGCCGCAAGACTCAAGCCCTGATGACATGGAATGTTACCTGCACATACTCACAATTTCTAGCAAGAAAGAACCCTGCTTGTTGTTTATCTTTGTCATCTTTCTACAATGAAACTATTACCCCTTGTCCCTCTTGTGCATGTGGCTGCCAGAACAAAAGGAATTGTGTCAAGAGTGACTCTAAAATTCTGAGCATGGTTGGTGTTCACACTCCAAAGAAAGACAATGAACCATTGATGCAGTGCACTCATCATATGTGTCCAATAAGGGTGCATTGGCATGTGAAGCAAAACTATAAGGACTATTGGCGAGTCAAGATTGCCATAACAAATTTCAATTACAGGATGAACTATTCCCTCTGGACTCTTGCAATTCAGCATCCAAATCTCAACAATGTTACACAAGTTTTCAGCTTTGATTACAAGCCTATACTTCCCTATGCTTCCATAAATGACACTGGCATGTTCTTCGGCATGAAATACTTCAATGATCTATTAATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAAGTGCTTCTTCAGAAGGACAAGGACACATTCACATTCAAGCAAGGTTGGGCATTTCCAAGAAAAGTCTACTTTAATGGTGATGAATGCATGCTTCCACCACCAGATTCCTATCCATTCCTCCCTAATTCTTCCCCTCAAACACCAAGTGCCTTCCCAGCACTCATTTTATCATTGATATTCTTCCTAGTTTTATGA 1293 0.4385 MRLVILVLCVIVLFSYAGAYDPLDPNGNVTIKWDIVSWTPDGYVADVTLYNFQMFRHIMNPGWTLGWTWAKKEVIWSMIGAQTTEQGDCSKFKGNIPHCCKKIPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPSQAISSFQISVGQAGTSNKTVKLPKNFTLLAPGPGYTCGRAKVVPSTTFLTPDKRRKTQALMTWNVTCTYSQFLARKNPACCLSLSSFYNETITPCPSCACGCQNKRNCVKSDSKILSMVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKQNYKDYWRVKIAITNFNYRMNYSLWTLAIQHPNLNNVTQVFSFDYKPILPYASINDTGMFFGMKYFNDLLMEAGPTGNVQSEVLLQKDKDTFTFKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSSPQTPSAFPALILSLIFFLVL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03149 430 PANTHER PROTEIN COBRA 6 423 IPR006918 GO:0010215|GO:0016020
Arst10g03149 430 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Arst10g03149 430 PIRSF COBRA 1 430 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03149 Arst-Chr10 99866476 99869526 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03149 8 428 COBRA Gene Family AT3G02210 65.589 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03149 - - gmx:100798678 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03149 10 99866476 99869526 Arst4g03920 4 117890288 117893314 PCT
Arst4g03921 4 117893417 117895699 Arst10g03149 10 99866476 99869526 PCT