Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03148 ATGTTGTCTTGTTCCGTTGCCAAAATCCGATTCTTCATCAAACCGCCTCCATGCATTTTGCTCTTCTTCCTTCTCTCTTTCACCTCCTTCACTTCAACAGAAGCATATGATGTGCTTGATCCAAACGGAAATATCACAATCAGATGGGATATTATAAGCTGGACACCAGATGGTTATGTTGCTGTTGTTACATTAAACAATTTCCAGCAATACCGCCACATCTCGGCGCCAGGGTGGTCGCTAGGGTGGACATGGGCAAAGAAAGAGGTAATATGGAGCATGATGGGAGGGCAGACTACCGAACAAGGCGATTGCTCGAAATTCAAGACAACCCCACCACATTGCTGTAAAAAGGACCCAACCGTTGTAGATTTACTTCCCGGAACACCATACAATCAACAAATTGCAAATTGTTGCAAAGGAGGTGTACTCAGCTCATGGGCACAGGATCCGGCAAATGCCATTGCATCATTTCAAATCAGTGTTGGTAGAGCTGGAACCTCTAACAAAACAGTCAAAGTGCCCAAGAACTTCACCTTGAAAGCACCGGGACCGGGTTATACGTGTGGGCCGGGAAAAATTGTTCAACCTACTCAATTCTTAACAGGAGATAAAAGAAGAAGGACTCAAGCTCTCATGACATGGAATGTGACATGCATGTATTCACAATTTCTAGCTCAGAAAACTCCCACTTGCTGTGTTTCACTCTCATCTTTCTATAATGATACCATTGTACCCTGCCCGACATGTTCGTGTGGCTGCCAGGGAAACTCTTCTCAATCCGGGAACTGTGTAGATCCAGATACACCGCATTTGGCATCGGTTGTTGCTAACCCTGCAAAGAGTTCCCCTTTCGTTCAATGTACTCGCCATATGTGTCCTGTTCGAGTTCATTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTCACTATTACTAATTTCAATTACAAGATGAACTATACAGATTGGAACTTGGTTATTCAACACCCGAATTTCGACAATCTGACTCAGCTTTTTAGTTTTAACTACAAGTCATTGACACCCTATGGCACAATAAATGATACAGCATTGCTATGGGGAATTAAGTTCTACAATGATTTGCTCATGGAAGCCGGTCCGGAAGGTAATGTACAATCAGAGCTACTCTTCCGAAAGGATAAATCAACTTTTACTTTCGACAAAGGTTGGGCGTTTCCTCGGAGGATCTATTTCAATGGTGACAACTGTGTGATGCCACCACCTGATGCTTATCCGTGGTTGCCAAATGCCAGTTCCCGGCGAGAGGTTTCCTTGCTAGCTTTAGTGCTGGCTTCCTTTGTAGTCTTTGCATTGTGCGCATATGCTTAA 1359 0.4408 MLSCSVAKIRFFIKPPPCILLFFLLSFTSFTSTEAYDVLDPNGNITIRWDIISWTPDGYVAVVTLNNFQQYRHISAPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKFKTTPPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPANAIASFQISVGRAGTSNKTVKVPKNFTLKAPGPGYTCGPGKIVQPTQFLTGDKRRRTQALMTWNVTCMYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCSCGCQGNSSQSGNCVDPDTPHLASVVANPAKSSPFVQCTRHMCPVRVHWHVKLNYKEYWRVKVTITNFNYKMNYTDWNLVIQHPNFDNLTQLFSFNYKSLTPYGTINDTALLWGIKFYNDLLMEAGPEGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRREVSLLALVLASFVVFALCAYA 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03148 452 PIRSF COBRA 9 452 IPR006918 GO:0010215|GO:0016020
Arst10g03148 452 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
Arst10g03148 452 PANTHER PROTEIN COBRA 24 441 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03148 Arst-Chr10 99863146 99866304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03148 4 446 COBRA Gene Family AT3G02210 74.273 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03148 - - gmx:100783820 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst10g03148 10 99863146 99866304 Arst4g03919 4 117878229 117887184 PCT
Arst4g03920 4 117890288 117893314 Arst10g03148 10 99863146 99866304 PCT