Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03100 ATGGAGAAAGGTAAATACTTAGCATTGGTTGGAACCGGTGCTCTGTTTGGCTCTGTATCTACCATCTTCTTTCTTAGGCTCCTTCAAAACCATAATGAAGTGGTTGATTCACTCTTAAAGTCACTAATTTTTTATTTATGTATTTTTTTTAATGCTACTGAGTTAAATGGTCTTGAGACTTGCACTATTGCTGGAAAGAAGAATGATAAGGCAGTTCATGAAGATCTTCTGAAGGATGAGATTGTTTCTGAACATCTAACTAGGAACATTCAGTTTTTTGGCTTTGAGTCTCAGCAGAAAGTGAGTGCATCATATGTTGTGGTCATTGGTCTTGGTGGGGTTGGCAGTCATGCTGCATCTATGCTCTTGAGATCAGGGGTCGGCAAGCTTCTTCTTGTGGACTTTGATCAGGTTTCTCTTTCTTCATTAAATCGACACGCTCTTGCAACAAGAGCAGATGTTGGCATCCCAAAAGCGCAGTGCCTTAAGGAGCATTTCTCATCTATCTTTCCTGAGTGCCAAGTAGATGCAAAAGTACTGCTATATGATTCATCTACCGAAGAAGAAATTTTGTCAGGCCAACCTGACTTTGTCTTGGATTGTATTGATAACATTGATACTAAGGTGGCACTTCTTGCTGCTTGTGTACGGAGGGGCTTGAAGGTGTTATCTGCCACTGGGGCTGGTGCTAGAGCTGATCCAACTAGAATACGCATTGCTGATTTAAGAGAGTCAACTAATGATCCATTGTCTCGAGCTGTGAGACACCGTTTGAGGAAAGATCATGGCATTGAAGGTGGCATCCCTGTTGTATTTTCTTTAGAAAAACCCAAAGCTAAGTTGCTTCCATTTAAGGGTCCAAATGGTGAAGAGGAAAATCCTTCAGACTATCAGATAGTACCAGGCTTCAGGGTCCGTATCATACCAGTGTTAGGCACAATCCCTGCGATATTTGGACAAGTTATGGCATCGTATGTTGTGACAGAATTAGCAGGATTTCAAGTTCAAACAGAACCGATAGTCAATTTTGATACCGATCATTACCATACTCTCCATCAACGCCTTATTGAGCATGAGGAGTTAGTATATGGAACATCACAGCAAGTGCAGGTAGATGTTGAAGAAGTGATGTATATTGTAAAAGAATTATGGCATGGAAGAAGTGCTAGAGACCAGCTTGTGAAAGAAGTTGGGCGAGGAATGTGGCGATTAGTTAATGAATTAATGCTTGTAAGGTGGGATTGCGAAAAGCCGGCTTCTATATCAAATTTAATTCTTTTGAAATTCAAAGAGGTTGATGAGCATGAATCTAGAACATTGGATGATATAAAGGAAAAGGAACCTGAATTCTACAACAGTGTAGATGCAGTGTTAAAACGAGCTGAAATTGACTTTGGCTATGCACATTAA 1410 0.4035 MEKGKYLALVGTGALFGSVSTIFFLRLLQNHNEVVDSLLKSLIFYLCIFFNATELNGLETCTIAGKKNDKAVHEDLLKDEIVSEHLTRNIQFFGFESQQKVSASYVVVIGLGGVGSHAASMLLRSGVGKLLLVDFDQVSLSSLNRHALATRADVGIPKAQCLKEHFSSIFPECQVDAKVLLYDSSTEEEILSGQPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGARADPTRIRIADLRESTNDPLSRAVRHRLRKDHGIEGGIPVVFSLEKPKAKLLPFKGPNGEEENPSDYQIVPGFRVRIIPVLGTIPAIFGQVMASYVVTELAGFQVQTEPIVNFDTDHYHTLHQRLIEHEELVYGTSQQVQVDVEEVMYIVKELWHGRSARDQLVKEVGRGMWRLVNELMLVRWDCEKPASISNLILLKFKEVDEHESRTLDDIKEKEPEFYNSVDAVLKRAEIDFGYAH 469
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03100 469 Pfam ThiF family 87 349 IPR000594 -
Arst10g03100 469 Gene3D - 77 343 - -
Arst10g03100 469 FunFam tRNA threonylcarbamoyladenosine dehydratase 2-like 78 337 - -
Arst10g03100 469 CDD YgdL_like 93 327 - -
Arst10g03100 469 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 86 344 IPR035985 GO:0008641
Arst10g03100 469 PANTHER TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE 65 464 IPR045886 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst10g03100 Arst-Chr10 99295802 99303401 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03100 127 229 Sulfurtransferasese or Rhodanese AT5G55130 31.068 5.97e-06 46.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03100 K22132 - gmx:100815445 776.548