Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03092 ATGTACATTGAGCCATTGGAACTCCATGATGAGGTTCTCAGGTGCAATCCTGAAGCATTTGAATACAGTACCACAGGTCCTGTCAAGGAGCAGATCTCTGGTCGTGCGGTGGGTGAGAAGAAGCTCCGTGAGTCGAGTCTTCCTGGCATAAATCAAACTAAAGAAGACTACAATGCAACCCCTAATCATCAACATGACCATTTTTCTTCAAATGACATTTCAACGTTATCTTCCAAAAAATCAAAAGTAAGGAAGAAAGGAGGCGATGGAATTTCTGTAGGGCCCAGTTCTGCCGAGCTTCAAGATGCAACCATTGGAAGGTTTTGTGAGTTTTTGGAAGACTTATGCAGCAAAGCTGAAGTTCAGACTGATGATCGAGATGAAGCAGAATGGCTGCCATTGTCACTTTCAGATCTTAGATTGCTTGTTAATGAAATAATGTCTATACATGAGAAGAAACTTCTGCATATTGTTCCTGTTGAAGTCCTTGTGAGGATACTGAATGTTCTAGATCATCAAATACATAGGGCAGAAGGCCTGTCAATTGAGGATTGTGATAATTCAGACTCGGAACTAATTTCATCTATTTTGATCGCATTGGAGTCCATTCATGCTGCACTAGCTGTGATGGCTCACACTCAGATGCCGAAGCAAATTTATAAAGAAGAGATCATTGAGAGAATTTTGGAGTTTTCCAGGCGTCAAATAATGGATGTTATGTGTGCAAGTGATCCATCGTATCGTGCGTTACACAGACCTAGTGAAAACACTGCATGTGAAGTTGATGATTATTATGAAGAAAATGATGCAGAATTTGGTTCGGCAAGCAAGAAACGTCGTACCAGCAAGAGTACAAAGATGAGGAAATCAACATCAAACAGGGTTTCTTCTGCTGTGAATACTATCCTTCAGAAATTATGCACTGTTCTTGGATTGCTGAAGGATTTGTTGTTAATTGAGAGGTTATCAGATAGTTGCATTCTTCAACTTGTAAAAACAAGCATTACAACATTCATGGTTGAGAATATCCAGCTTTTGCAGCTGAAGGCAATTGGTTTACTTAGCGCGATATTCTATTTATACACACAACATCGCACATATGTGATAGATGAAGTGCTTCAGCTTCTTTGGAAATTACCATATTCAAAACGAGCTATAAGAGCCTACCACATACGCGAGGAAGAGCAAAGACAGATCCAGATGGTTACCGCTTTGCTGATTCAGTTAATTCACTGTAGTGCTAACCTTCCAGATGCTTTAAGACAAGCATCAAGTGGTAATGCTGTGTTGGAAGTCTCGGTTGACCCTAATGATCCAACTAAAGGCCATGAAGCCACAACAGAAGCTTGCTGTCTATTCTGGAGCCGTGTACTTCAGCGGTTTGCAAGTGTGAAGACCCAGGATGCTTCAGAGCTGAAATCCATAATGGAGAATCTTGTTACTGATTTACTCACAACTTTAAATTTGCCCGAGTATCCTGCTTCAGCTCCCATTTTGGAGGTTCTCTGTGTCCTACTACTTCAGAATGCTGGGCCGAAATCTAAGGATGTCTCTGCACGTTCCATGGCTATTGATATTCTTGGTACAATTGCTGCAAGGTTGAAGCGTGATGCTTTGGTTTGTAGCCAGGAGAAGTTCTGGATACTTCAGGATTTACATGGTCAGGATAGTGCTAATCAGCAATATCCAAAAGATTCTTGTTGTGTCTGTATGGATGGCAGTACCGACAATTTATTGATATGCCATGGCTGCCAGAGACCCTTCCACACTGACTGCCTGGGTATTAAAGAACATGAAGTTTCCAACCGGAACTGGTACTGTCAGACATGCATCTGTCATAAGCAACTGCTTGTATTACAGTCATATTGCAATTCCCGGTGTAAGGATGACGTGACAAAGAAACGTAATGCGTCAAAAGATTCTGAAATTTCAAAGCATGAAATTGTTCAACAGTTGCTCTTGAATTACCTTCAAGATGTCACTTCTGCTGATGATATCCATCTGTTCGTTTGCTGGTTTTATCTCTGCCTGTGGTACAAAGATGATCCTAATTGTCAGCGAAAGCCTATATACCACCTTGCTAGAATGAAATCAAGAATCATTGTACGGGACTCTAGTACCATCTCATCCACGTTGACGAGGGATTCAATTAAGAAGATTACTTTAATTTTGGGTCAAAACAGTTCATTTTGTCGAGGGTTTGATAAGATTCTTCACGTGCTTCTGGCAAGCCTAAGGGAGAACTCTCCAGTTATCAGGGCTAAGGCTTTACGAGCTGTTAGTATCATTGTAGAGGCTGATCCAGAGGTATTGGGTGATAAACGAGTACAGTCAGCTGTTGAAGGAAGGTTTTGTGACTCTGCAATTTCTGTTAGAGAAGCAGCATTGGAACTTGTCGGCAGGCACATTGCTTCACATCCAGATGTGGGTTTTAAGTATTTTGAAAAGATCGCTGAGAGAATCAAGGATACTGGAGTTAGTGTTCGAAAACGAGCAATAAAACTTATTCGAGACATGTGCAGTTCAAATGTCAACTTCTCTGGCTATACTAGGGCTTGCACAGAAATAATTTCACGCATTAGTGATGATGAGTCAAGTATCCAGGACCTTGTTTGCAAAACGTTTCATGAGTTCTGGTTTGAGGAGCCTTATGGTTCACAAACTCAGGTCTTTGGAGATGGTAGTACTGTTCCACTCGAGGTGGCTAAGAAAACAGAGCAAATTGTTGAAATGCTCAGGAGAATGCCCAACAATCAACTTCTTGTAACTGTAATAAAGCGCAACTTATCACTTGATTTTTTGCCCCAAGCTGCAAAAGCTGTTGGTGTCAACCCTGTGTCCCTTGCTACAGTGCGTAAGCGCTGTGAGTTAATGTGCAAATGCTTGCTGGAGAAGATATTGCAGGTTGAGGAAATTAATAGCAATGAAGTGGAGGTGCATGCTCTACCATATGTGCTGGCCTTGCATGCATTTTGTCTTGTGGACCCAACTCTCTGTGCACCTGCTTCAAACCCATCCCAGTTTGTTGTTACTTTGCAGCCATATCTTAAAACGCAGGTTGACAATCGCATGGTTGCACAGCTAGTTGAGAGTATAATCTTTGTAATTGATGCTGTGTTGCCCTTACTTCGGAAGTTACCTCCAAATATTGTTGAGGAGCTAGAGCAAGATTTGAAACATATGATTGTCCGGCATTCTTTCTTGACAGTAGTCCATGCTTGTATCAAGTGCCTCTGCTCTGTAAGCAACATAGGCAGTAAAGGGGCTGCTGTGGTGGAGCATCTTATTCAGGTCTTCTACAAATGTTTGGACAATAAGCAGCAAGTTGGGCGATCACTCTTTTGTCTTGGATCACTCATTCGATATGGCAATTCTTTGTTGGTAAGCTCAAGCAATAAAGTTATTGATGTCAGAAGGAGTCTTACCTTATGTATAAAGTTTCTCTCTGAGGAGGATTTTGTTGTTAAGGCTAGATCATTGCAGGCACTAGGGTTTATTTTAATTGCCAGGCCTGAATACATGTTGGAAAAGGATATTGGAAAGATACTGGAGGGAACATTATCTTCAAATGCTGACACTCGTCTTAAGATTCAAGCATTGCAAAACATGTTGGAGTATCTCCTTGATGCTGAAAGCAAAATGGGAACAGATAAACCTGATGATAACGTAACTGGTTACACAGTTGGAGCTGTGCAGAGTGTACCCGTTGCTGCTGGAGCTGGGGACACAAACATATGCGGGGGTATAATTCAGTTATATTGGGATAATATTTTAGGCAGATGTTTGGATTCCAATGAACAAGTCCGCCAATCAGCTCTGAAGATAGTTGAAGTTGTGTTGCGCCAAGGTCTTGTTCACCCAATCACTTGTGTTCCATATCTAATAGCACTTGAAACTGATCCTCTGGAGTCAAATGCAAAGCTGGCTCATCATCTCCTAATGAATATGAATGAGAAGTACCCTGCATTTTTTGAAAGTCGTTTGGGTGATGGACTTCAAATGTCATTTATTTTCATGCAATCAATTAGCACTGCTTCTGAAAATGGCAATCAGAAAATCCCATCTAAAATCCCTGTATCTGGAAAAGGGAAACCCGAAACTGTCTCACTAGCTCAAGCAAGACTTGGTGTTTCTAGAATATACAAGCTCATCCGGGGGAACAGGAATTCAAGGAATAAATTTATGTCATCAATTGTGCGAAAATTTGACAATCCAAAGTGGAGCCATTCAGTAATAGCTTTCTTATCATACTGCACAGAGGTCCTTGGATTGCTGCCTTTCATTTCCCCTGATGAGCCCCTTTATCTAATATATGCCATCAATCGAATAGTTCAAATTAGGGCTGGGCCACTAGAAGCGAATTTTAAAGCCTGGAGTTCAAGGTTATCAAGAAATGAGAATCAAAGTACACCAAATGGGAATGGAATGTATCAACAGGAAACAGACAAGTCCACTATTATAACCCAAGGAACATCAATGGATTTGAATGGAACATTTCAGCAAAATCTAGATGCTCGTCCAGATTTGAATGACATGAGATCAGTGGATTTAAATGGAACATTCTACCAACAGCCAGATGATACTTTATCGAATAATGGCAGCTCCGAACCAAAGCCGCATGCTGTGGGTTCTGATTATTTTGCCTTCTCAAAAGATGATCTGGAGAGAGTTCAGGCAGACTGCTTATCAGCAATTGCACTGCAATTTCTTCTAAAATTGAAGAGACATCTGAAAATCATGTATAGTCTCAATGATGCTAGATGTCAGGCATATTCACCAACTGAACAGCCAAAACCTGGAGAAGTTATCTCCAGACAGAATATCCCATTTAATATTAGTGAAACTCAGTTCAGCGTGCCTTCAAATCCACAAGAATTAATACAGAGATACCAGGAATTTAAGTATGCATTGAGGGAAGATACGGTGGATTATTCACTGTACACTGCAAATATAAAACGGAAGCGACCTACACCCAGAAAAGTTCGGAGATCTGCACCCATGGCTAGTGGGGACTTAGAGGATGATGATGATGATGATGATGATTGGGGTGGTGGAATGCGCAAGATAACAAGTAGTGGTGGCCGTAGAGCTAACCTTAGAAGCAGCAGTAGGCAATATTGA 5121 0.412 MYIEPLELHDEVLRCNPEAFEYSTTGPVKEQISGRAVGEKKLRESSLPGINQTKEDYNATPNHQHDHFSSNDISTLSSKKSKVRKKGGDGISVGPSSAELQDATIGRFCEFLEDLCSKAEVQTDDRDEAEWLPLSLSDLRLLVNEIMSIHEKKLLHIVPVEVLVRILNVLDHQIHRAEGLSIEDCDNSDSELISSILIALESIHAALAVMAHTQMPKQIYKEEIIERILEFSRRQIMDVMCASDPSYRALHRPSENTACEVDDYYEENDAEFGSASKKRRTSKSTKMRKSTSNRVSSAVNTILQKLCTVLGLLKDLLLIERLSDSCILQLVKTSITTFMVENIQLLQLKAIGLLSAIFYLYTQHRTYVIDEVLQLLWKLPYSKRAIRAYHIREEEQRQIQMVTALLIQLIHCSANLPDALRQASSGNAVLEVSVDPNDPTKGHEATTEACCLFWSRVLQRFASVKTQDASELKSIMENLVTDLLTTLNLPEYPASAPILEVLCVLLLQNAGPKSKDVSARSMAIDILGTIAARLKRDALVCSQEKFWILQDLHGQDSANQQYPKDSCCVCMDGSTDNLLICHGCQRPFHTDCLGIKEHEVSNRNWYCQTCICHKQLLVLQSYCNSRCKDDVTKKRNASKDSEISKHEIVQQLLLNYLQDVTSADDIHLFVCWFYLCLWYKDDPNCQRKPIYHLARMKSRIIVRDSSTISSTLTRDSIKKITLILGQNSSFCRGFDKILHVLLASLRENSPVIRAKALRAVSIIVEADPEVLGDKRVQSAVEGRFCDSAISVREAALELVGRHIASHPDVGFKYFEKIAERIKDTGVSVRKRAIKLIRDMCSSNVNFSGYTRACTEIISRISDDESSIQDLVCKTFHEFWFEEPYGSQTQVFGDGSTVPLEVAKKTEQIVEMLRRMPNNQLLVTVIKRNLSLDFLPQAAKAVGVNPVSLATVRKRCELMCKCLLEKILQVEEINSNEVEVHALPYVLALHAFCLVDPTLCAPASNPSQFVVTLQPYLKTQVDNRMVAQLVESIIFVIDAVLPLLRKLPPNIVEELEQDLKHMIVRHSFLTVVHACIKCLCSVSNIGSKGAAVVEHLIQVFYKCLDNKQQVGRSLFCLGSLIRYGNSLLVSSSNKVIDVRRSLTLCIKFLSEEDFVVKARSLQALGFILIARPEYMLEKDIGKILEGTLSSNADTRLKIQALQNMLEYLLDAESKMGTDKPDDNVTGYTVGAVQSVPVAAGAGDTNICGGIIQLYWDNILGRCLDSNEQVRQSALKIVEVVLRQGLVHPITCVPYLIALETDPLESNAKLAHHLLMNMNEKYPAFFESRLGDGLQMSFIFMQSISTASENGNQKIPSKIPVSGKGKPETVSLAQARLGVSRIYKLIRGNRNSRNKFMSSIVRKFDNPKWSHSVIAFLSYCTEVLGLLPFISPDEPLYLIYAINRIVQIRAGPLEANFKAWSSRLSRNENQSTPNGNGMYQQETDKSTIITQGTSMDLNGTFQQNLDARPDLNDMRSVDLNGTFYQQPDDTLSNNGSSEPKPHAVGSDYFAFSKDDLERVQADCLSAIALQFLLKLKRHLKIMYSLNDARCQAYSPTEQPKPGEVISRQNIPFNISETQFSVPSNPQELIQRYQEFKYALREDTVDYSLYTANIKRKRPTPRKVRRSAPMASGDLEDDDDDDDDWGGGMRKITSSGGRRANLRSSSRQY 1706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03092 1706 Gene3D - 897 1325 IPR011989 -
Arst10g03092 1706 PANTHER NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED 31 1701 IPR033031 GO:0003682|GO:0010468|GO:0061780
Arst10g03092 1706 PANTHER NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED 31 1701 IPR033031 GO:0003682|GO:0010468|GO:0061780
Arst10g03092 1706 FunFam Sister chromatid cohesion protein 715 883 - -
Arst10g03092 1706 ProSitePatterns Zinc finger PHD-type signature. 567 610 IPR019786 -
Arst10g03092 1706 MobiDBLite consensus disorder prediction 46 77 - -
Arst10g03092 1706 ProSiteProfiles Zinc finger PHD-type profile. 564 613 IPR019787 -
Arst10g03092 1706 SUPERFAMILY ARM repeat 733 1440 IPR016024 -
Arst10g03092 1706 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 550 618 IPR013083 -
Arst10g03092 1706 SUPERFAMILY FYVE/PHD zinc finger 565 618 IPR011011 -
Arst10g03092 1706 MobiDBLite consensus disorder prediction 33 95 - -
Arst10g03092 1706 SMART PHD_3 566 611 IPR001965 -
Arst10g03092 1706 Pfam HEAT repeat associated with sister chromatid cohesion 758 799 IPR026003 -
Arst10g03092 1706 MobiDBLite consensus disorder prediction 1655 1706 - -
Arst10g03092 1706 Gene3D - 701 878 IPR011989 -
Arst10g03092 1706 Pfam Sister chromatid cohesion C-terminus 1246 1443 IPR024986 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03092 565 610 PHD Transcription Factor Family AT5G12400 44.681 1.56e-06 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03092 K06672 - gmx:100792021 2669.8