Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03033 ATGGAGGCTCCGCATTCTGTTAAAGTTATAACGGTGTCACAGGACGGAAAAGGAGACTACCGGACGGTGCAGGAGGCTATCGATGCGGTGCCGGTAGGCAACACTCGCCGGACGGTGATCCGGGTGGCCCCGGGAACCTACCGGCAGCCTGTTTATGTGGCGAAAACAAAGAGGTTCATCACGCTTTCCGGCATATTCCTTGAGGACACTGTTCTCACATGGAATAACACTGCTGCAAGAATCCAACACCACAAAGGTGAAAAGGTGATAGGAGGAGGAACGTTTGGTTGTGGCAGCACCATTGTGGAAGGTGAAGACTTCATTGCTGAGAACATTACCTTCGAGAATTCTTCCCCTCAGGGTTCAGGGCAAGCTGTGGCAATGAGAGTAACAGCTGATCGATGTGCTTTCTATAATTGCAGGTTCCTTGGATGGCAGGACACACTGTATTCACATTATGGCAAACAATATTTTAGAGATTGCTACATTGAAGGAAGTGTGGACTTCATTTTCGGCAATAGCACTGCACTCTTGGAGCATTGTCATATCCACTGCAAATCTCAAGGCTTCATAACAGCACAGAGCAGAAAATCTCCACATGAAACAACTGGTTTTGTGTTCCAAAGATGTGTTATCACAGGTAATGGGGGAAGGGAATATGCATATCTTGGAAGACCATGGGGACCCTTTGCAAGAGTGGTCTTTGCATTCACTTATATGGATCCATGTATACAACTTGCTGGTTGGAACAATTGGGGTAAAGCTGACAATGAGAAAACTGCTTGCTTTTTTGAATACAGGTGTTTCGGGCCGGGTTATTGCCGATCAAAACGGGTCAAATGGGCCAGAGAAGAAGCAGAACAGTTCTTGCTTCATAGCTTCATTGATCCAGAAGCAAATAAACCTTGGCTTGCTCAAAGAATGGCCTTCAAGGTTCCATATTTTGCTTAG 951 0.4627 MEAPHSVKVITVSQDGKGDYRTVQEAIDAVPVGNTRRTVIRVAPGTYRQPVYVAKTKRFITLSGIFLEDTVLTWNNTAARIQHHKGEKVIGGGTFGCGSTIVEGEDFIAENITFENSSPQGSGQAVAMRVTADRCAFYNCRFLGWQDTLYSHYGKQYFRDCYIEGSVDFIFGNSTALLEHCHIHCKSQGFITAQSRKSPHETTGFVFQRCVITGNGGREYAYLGRPWGPFARVVFAFTYMDPCIQLAGWNNWGKADNEKTACFFEYRCFGPGYCRSKRVKWAREEAEQFLLHSFIDPEANKPWLAQRMAFKVPYFA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03033 316 ProSitePatterns Pectinesterase signature 2. 163 172 IPR033131 -
Arst10g03033 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 299 - -
Arst10g03033 316 Gene3D - 5 311 IPR012334 -
Arst10g03033 316 FunFam Pectinesterase 6 309 - -
Arst10g03033 316 SUPERFAMILY Pectin lyase-like 8 299 IPR011050 -
Arst10g03033 316 Pfam Pectinesterase 10 288 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03033 Arst-Chr10 98533080 98538171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03033 4 309 Carbohydrate Esterase AT5G47500 39.185 1.67e-70 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03033 K01051 - qsa:O6P43_004451 544.658