Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03025 ATGAATAATCGTGTTGATTTGGTGGAGAAAATCACTCCGTGGAGGGAATCATGGAAAGTGCATGTTAAAGTTGTGAAGTTGTGGTACCAGAAGAATACAGCTTTGGATCCTTCTCAAAATCTGTTGCATATGGTCTTAATGGATGAGAAGTTACACAAGATCCAAGCTACCATTAGAGATGAGCTTATATCAAAGTTTGCTGTGTCTCTAAATGAAGGTGATCTGTATTTGATAACCAATTTTACAGTTTTGCCAAACACTGGTTTGAACAGAGTGACCAAACATCGGTTCAGACTTTTGTTCCAATACAAGACCTCTGTTGTTTCTGTGGTCTCTCCAAGGATAACTCATTCCGGGTTGTGTTTTACATCAATAGATGAAATTGATCAAATGACAAGGGACCACAATTTCCTTATTGACTTTGTTGGGATCATTACTGGTGTTCGAAAAGAAAGAGATGTAGCATCATATGGGAAGCTCATCAAAGCAGTTGTGCTAGAAGTTTTTAGTCATGGGAAAAAGGTCCAATGCAATGTGTTTGGAAATGCTTGTGATCTCTTGGAATATGAAAACTTACAAAAATATCCAAGATCTCCACTGATTGTCCTTGAGTCTTTTAAAATCAAAGCAATTGAAGGTGGAGTAATTCTACAGAATGTGATCAATATCTCTAGATTATTCATTAATCCAGACATTCCTGAGTCTGTTGAGTTCCTAAGCAGATTTAGTGTAGCCAGTTATGGATTCTCAAGACTTGTGACCAATGACCTTGGATACTTAATTTCTAAAGTTGATGGTGATTATTTCAATCCCAAAGAGATCAGTAGTATTCAAGATCTTGATGTAGATAACAGGGATGCTCATTACTTTGTAATTGAGACAATTAAGGAAGTTATGGATGAACCAGATTGGTGGTACTACTCATGTGTATGTGGTCATCCTGTTGTTGACCATGAGGATCTCTACCTTTGTGATGCTTGTTGTTCATGTGTTGAACATGTTATGCTCAAGTATAGGATTCGGGTAAAGATTCACCATGCTGGGTGTGATGTTTTGTTTGTTCTGCTTGATAATGCGGCAACAAAACTATTTGGAAAAACCTATTCTGAAGCATTTCTCAGGATAGACGAAGAATTCCCTGTTGATCCTAGTGTGCTTGCAGTATCAACTCCTTCATATTGA 1182 0.3748 MNNRVDLVEKITPWRESWKVHVKVVKLWYQKNTALDPSQNLLHMVLMDEKLHKIQATIRDELISKFAVSLNEGDLYLITNFTVLPNTGLNRVTKHRFRLLFQYKTSVVSVVSPRITHSGLCFTSIDEIDQMTRDHNFLIDFVGIITGVRKERDVASYGKLIKAVVLEVFSHGKKVQCNVFGNACDLLEYENLQKYPRSPLIVLESFKIKAIEGGVILQNVINISRLFINPDIPESVEFLSRFSVASYGFSRLVTNDLGYLISKVDGDYFNPKEISSIQDLDVDNRDAHYFVIETIKEVMDEPDWWYYSCVCGHPVVDHEDLYLCDACCSCVEHVMLKYRIRVKIHHAGCDVLFVLLDNAATKLFGKTYSEAFLRIDEEFPVDPSVLAVSTPSY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03025 393 SUPERFAMILY Nucleic acid-binding proteins 122 244 IPR012340 -
Arst10g03025 393 Pfam Domain of unknown function DUF223 44 137 IPR003871 -
Arst10g03025 393 CDD RPA1_DBD_A_like 19 107 - -
Arst10g03025 393 Gene3D - 7 111 IPR012340 -
Arst10g03025 393 SUPERFAMILY Nucleic acid-binding proteins 7 110 IPR012340 -
Arst10g03025 393 PANTHER OS03G0429900 PROTEIN 7 380 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Arst10g03025 393 Gene3D - 264 385 IPR012340 -
Arst10g03025 393 Gene3D - 115 248 IPR012340 -
Arst10g03025 393 SUPERFAMILY Nucleic acid-binding proteins 269 377 IPR012340 -
Arst10g03025 393 CDD RPA1_DBD_B_like 140 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03025 Arst-Chr10 98357889 98360085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03025 1 367 Core DNA Replication Machinery Family AT5G08020 20.361 1.67e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03025 - - ahf:112717926 794.653