Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03021 ATGGAGGGATCCATAGGCCTAAGAAAAGGTGCATGGGCTAAGGTGGAAGATGACCTTCTAAGAGCTTGTGTTGAACAATATGGAGAAGGAAAGTGGCACCTAGTTCCTTCTAGAGCGGGGTTGAACAGATGCCGCAAAAGTTGTAGACTGAGATGGTTGAATTATCTGAAACCAAATATAAAGCGTGGAGAGTTCTCTGAAGATGAAGTTGATCTCATGATTAGAATGCACAGACTTTTGGGAAACAGATGGTCCTTAATTGCTGGAAGACTTCCGGGAAGAACGCCAAACGATGTGAAGAATTACTGGAACACCTATGTTCGAAGGAATAATAAGCACACTTCATCATCATCATCAGTACCCTCTCCTTCATCAGTGGTGACGACAGTGAAACGTCATGACCATATTAATCATCAGGTAATAAAACCTCATCCCCGAACTTTCTCGAAAGCATCGCCATGGTTATTATTAAAGAAAACATCTACAAGTGGTTATCATAATAATAACAAGCAGAGGGATGGGGCCAAGGCAGAAGAAGAGTGCACCGATAATAATAATAATAATAATGATAATAATGGTTCTGGTGGTGGATGTGATGATGGGAACACGTGTCGGAACAAGAACGGTGGCAAAGGGGATGAAGAGAAGTTGAACGACGGATGCTTACTCTCAGTCTCAGGTGCTGAGGAAGAAGAAGAAGAAGAAGACTGGAAGCTGCTTTTACCTGACTTCAATTGGGATGCTCATAATGATGATCACTTCTTGAAGGACGCTTCTGATGCTGACCACGATATGCTTATTAATGTCCATGGTCAAACTTGGAGTGATATCCTTCTTGATATCAATTTGTGGGATCCACAATAA 864 0.419 MEGSIGLRKGAWAKVEDDLLRACVEQYGEGKWHLVPSRAGLNRCRKSCRLRWLNYLKPNIKRGEFSEDEVDLMIRMHRLLGNRWSLIAGRLPGRTPNDVKNYWNTYVRRNNKHTSSSSSVPSPSSVVTTVKRHDHINHQVIKPHPRTFSKASPWLLLKKTSTSGYHNNNKQRDGAKAEEECTDNNNNNNDNNGSGGGCDDGNTCRNKNGGKGDEEKLNDGCLLSVSGAEEEEEEEDWKLLLPDFNWDAHNDDHFLKDASDADHDMLINVHGQTWSDILLDINLWDPQ 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03021 287 Gene3D - 63 136 - -
Arst10g03021 287 Gene3D - 9 61 - -
Arst10g03021 287 MobiDBLite consensus disorder prediction 161 201 - -
Arst10g03021 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 60 IPR017930 -
Arst10g03021 287 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Arst10g03021 287 CDD SANT 64 107 IPR001005 -
Arst10g03021 287 SMART sant 61 109 IPR001005 -
Arst10g03021 287 SMART sant 8 58 IPR001005 -
Arst10g03021 287 CDD SANT 11 56 IPR001005 -
Arst10g03021 287 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Arst10g03021 287 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Arst10g03021 287 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 211 - -
Arst10g03021 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Arst10g03021 287 MobiDBLite consensus disorder prediction 181 201 - -
Arst10g03021 287 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Arst10g03021 287 FunFam Myb transcription factor 9 61 - -
Arst10g03021 287 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03021 Arst-Chr10 98294314 98298546 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03021 2 149 MYB Transcription Factor Family AT1G66370 60.135 2.07e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst10g03021 Myb_DNA-binding 1.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst10g03021 - K16166 adu:107471154 567.385