Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03017 ATGGGACGCTCACCATGCTGCGACAAAGTTGGCTTAAAGAAAGGTCCATGGACTCCTGAAGAGGATCAGAAACTCTTAGCTTACATTGAAGAACATGGCCATGGAAGCTGGCGTGCTTTACCATCTAAAGCTGGGCTTCAGAGATGTGGTAAGAGCTGCAGGCTTAGATGGACTAATTATCTTAGACCTGATATTAAAAGGGGAAAGTTTAGTTTGCAAGAAGAACAAACCATCATTCAACTTCATGCCCTATTAGGGAACAGGTGGTCAGCAATAGCAACACATTTGCCAAAGAGAACAGATAATGAAATCAAGAATTACTGGAACACGCATCTAAAGAAGAGGCTAACAAAGATGGGAATCGATCCCGTCACTCACAAACCCAAGAACGACACTCTCCTCTCTAGCGACGGTCAATCCAAGACCGCCGCTAATCTCTCCCACATGGCCCAATGGGAGAGCGCTCGCCTCGAAGCCGAGGCGAGACTAGTCAGAGAATCGAAACTAAGATCACACCTCACAACTTCTTCCTCATCAAACAACAAACCATCATCAGATGTAGTATCAGCAGCACTCCCACCAACTATACCCTCTTCTCGTTCTTCTTCTTCTTCCATTGATGTCTTGAAAGCTTGGACCAATGGAGGATGGTTGAAATCCAATGAAGGAAACAACAACAACAACAACAGTGGTGGTGGTGGAATTGGAGACCTTGAGTCACCTACTTCTACTTTGTCTTTCTCTGAGAACAATGCACCACCGCCATTAACAATCATGGCTGGTGGTGGTGGCGGAGGAATAATTGAAGGGCATAATGGTAATAACGTGAAAGAAGAGGGTAAAGTGTATGATAGTCTTCATGAGTTAACAATGTCCGCCATGGAAGGAACGTCATGGGGTTCTTCGCATCAACATCACGATGTTATTGTTGGGGATGGTCACGTCGACGATGATGATGATGATCCCATGGTTGGTGAAGAAGGCTTCACGAATCTTCTTCTCAATGCAGCAGCACAATCTGATGATCGGAGTTTGTCTGAAGAAGGTGGTGGAGACGGAGCTAGTGGTGGTAGCGGCGACGGCGACGGTGACGGCAATGGTAGTGATTTCTATGAAGATAACAAGAACTACTGGAACAGCATTCTTAACTTAGTAAACTCTTCTCCTTCTGATTCCCCAATGTTCTAA 1188 0.4545 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPSKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPKNDTLLSSDGQSKTAANLSHMAQWESARLEAEARLVRESKLRSHLTTSSSSNNKPSSDVVSAALPPTIPSSRSSSSSIDVLKAWTNGGWLKSNEGNNNNNNSGGGGIGDLESPTSTLSFSENNAPPPLTIMAGGGGGGIIEGHNGNNVKEEGKVYDSLHELTMSAMEGTSWGSSHQHHDVIVGDGHVDDDDDDPMVGEEGFTNLLLNAAAQSDDRSLSEEGGGDGASGGSGDGDGDGNGSDFYEDNKNYWNSILNLVNSSPSDSPMF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03017 395 CDD SANT 69 112 IPR001005 -
Arst10g03017 395 Gene3D - 13 66 - -
Arst10g03017 395 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst10g03017 395 MobiDBLite consensus disorder prediction 129 147 - -
Arst10g03017 395 MobiDBLite consensus disorder prediction 168 264 - -
Arst10g03017 395 CDD SANT 16 61 IPR001005 -
Arst10g03017 395 SMART sant 13 63 IPR001005 -
Arst10g03017 395 SMART sant 66 114 IPR001005 -
Arst10g03017 395 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst10g03017 395 MobiDBLite consensus disorder prediction 339 372 - -
Arst10g03017 395 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Arst10g03017 395 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst10g03017 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Arst10g03017 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Arst10g03017 395 MobiDBLite consensus disorder prediction 217 253 - -
Arst10g03017 395 MobiDBLite consensus disorder prediction 122 147 - -
Arst10g03017 395 FunFam MYB transcription factor 69 116 - -
Arst10g03017 395 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 209 - -
Arst10g03017 395 FunFam MYB-related transcription factor 13 66 - -
Arst10g03017 395 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst10g03017 395 Gene3D - 69 116 - -
Arst10g03017 395 MobiDBLite consensus disorder prediction 297 325 - -
Arst10g03017 395 MobiDBLite consensus disorder prediction 170 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03017 Arst-Chr10 98190989 98194464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03017 1 395 MYB Transcription Factor Family AT3G01140 56.436 9.29e-132 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst10g03017 Myb_DNA-binding 1.3e-15 CL0123