Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst10g03015 ATGAATACAAAGATTGAACTGCCACCAGGTTTCAGGTTTCATCCAACAGATGAAGAGCTCATAACTCACTACCTCTCTCAGAAGGTTGTTGCTAGCTGCTTCTATGCAACTGCCATTATTGGAGAGGCTGATTTCAACAAGTGGAGGGGCAAAATGGGAGAAAAAGAATGGTATTTTTTCTGTTTGAAGGACAAAAAATACCCAACAGGTGAAAGGACAAATAGAGCCACTGGTGCTGGGTACTGGAAGGCCACAGGAAAAGACAGAGAGATATACAATGCAAAAGCAAAAGCACTTATTGGGATGAAGAAAACACTTGTTTTCTACAAAGGAAGAGCTCCAAATGGTGAAAAGACAAATTGGGTCATGCATGAATATAGGTTGGAAGGCGATAATAAACCTTCTATATACAATCTTCCCAAAACAACCAAGAAAGAGTGGGCTTTGTGCAGAGTTCTACACAAAAGTGAAAAGAAAGTAATGCATGTTCCACAACCACAGGGATTGGTTGAGTTCAGCTCTTATGAAAATAAGGAACTTCCCCAATTGATGGATTCTTCACAAGTAACATTCTTTTCATCAGACCCAAATAATCAAAGTGAGGATCCAAATCCAATCACACGTGATGATGATAATAATAATAATGATGACATCATAGTTGATAGCATTGAAACTCCTTTCTTGGAACAACAACCACCTTATTATTCTTCATCCTATGATTCTTCAGATTTAGACACCCTTAACCCTGCCACATGGGATATTTCCGAAAATGCCCCTACAAGTAATGCGTCTAAGGAGACGGACTTTGATGCTGACATGTTCTCTTTGATGTACAACAATAGAGAAGTGTTCCAAACATCATTTGAGAATCAGGAATATTATGCATATGATTCTATGGGACATGTGGACAATGGTTCCCTATGGAATTTTTAG 933 0.3869 MNTKIELPPGFRFHPTDEELITHYLSQKVVASCFYATAIIGEADFNKWRGKMGEKEWYFFCLKDKKYPTGERTNRATGAGYWKATGKDREIYNAKAKALIGMKKTLVFYKGRAPNGEKTNWVMHEYRLEGDNKPSIYNLPKTTKKEWALCRVLHKSEKKVMHVPQPQGLVEFSSYENKELPQLMDSSQVTFFSSDPNNQSEDPNPITRDDDNNNNDDIIVDSIETPFLEQQPPYYSSSYDSSDLDTLNPATWDISENAPTSNASKETDFDADMFSLMYNNREVFQTSFENQEYYAYDSMGHVDNGSLWNF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst10g03015 310 FunFam NAC domain-containing protein 100-like 16 159 - -
Arst10g03015 310 SUPERFAMILY NAC domain 5 155 IPR036093 GO:0003677|GO:0006355
Arst10g03015 310 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 228 - -
Arst10g03015 310 MobiDBLite consensus disorder prediction 189 218 - -
Arst10g03015 310 Pfam No apical meristem (NAM) protein 8 128 IPR003441 GO:0003677|GO:0006355
Arst10g03015 310 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Arst10g03015 310 MobiDBLite consensus disorder prediction 189 203 - -
Arst10g03015 310 ProSiteProfiles NAC domain profile. 7 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst10g03015 Arst-Chr10 98159605 98162082 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst10g03015 5 194 NAC Transcription Factor Family AT5G39610 62.437 6.77e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst10g03015 NAM 1.2e-32 No_clan